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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4imt H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.933
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.919
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.916
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.916
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.912
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.909
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.906
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.905
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.905
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.904
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.904
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.904
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.904
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.903
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.903
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.903
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.903
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.903
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.903
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.902
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.901
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.901
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.901
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.901
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.901
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.901
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.900
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.899
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.898
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.898
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.898
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.891
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.891
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.891
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.891
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.890
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.889
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.888
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.888
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.887
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.887
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.887
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.886
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.886
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.886
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.884
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.881
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.879
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.879
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.876
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.874
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.873
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.872
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.871
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.869
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.867
3png H4BNitric oxide synthase, brain 1.14.13.39 0.867
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.864
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.862
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.855
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.854
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.853
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.851
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.850
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.849
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.846
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.843
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.841
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.839
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.837
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.834
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.827
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.820
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.820
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.818
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.806
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.803
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.798
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.795
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.793
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.721
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.719
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.717
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.713
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.708
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.706
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.687
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.684
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.679