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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4iji 99T Glutathione S-transferase-like protein YibF

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4iji 99TGlutathione S-transferase-like protein YibF / 1.247
3frc 0HGGlutathione S-transferase 2.5.1.18 0.706
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.697
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.689
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.679
2imk GTXAGAP009194-PA / 0.677
5agy GTBTau class glutathione S-transferase / 0.675
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.673
1k0c GTBTranscriptional regulator URE2 / 0.672
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.665
1gss LEEGlutathione S-transferase P 2.5.1.18 0.665
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.665
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.661
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.656
2aaw GTXGlutathione S-transferase 2.5.1.18 0.655
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.651