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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4hyh 1AM Serine/threonine-protein kinase Chk1 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4hyh 1AMSerine/threonine-protein kinase Chk1 2.7.11.1 0.981
3u9n 09HSerine/threonine-protein kinase Chk1 2.7.11.1 0.768
4hyi 1AOSerine/threonine-protein kinase Chk1 2.7.11.1 0.766
4fti H7KSerine/threonine-protein kinase Chk1 2.7.11.1 0.691
1zys 199Serine/threonine-protein kinase Chk1 2.7.11.1 0.668
4fsm HK1Serine/threonine-protein kinase Chk1 2.7.11.1 0.652