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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4hkf ACO Alpha-tubulin N-acetyltransferase 1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 1.390
4ag7 COAGlucosamine 6-phosphate N-acetyltransferase / 0.922
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.895
5kf8 ACOPredicted acetyltransferase / 0.891
2psw COAN-alpha-acetyltransferase 50 / 0.880
5kgp ACOPredicted acetyltransferase / 0.878
3vwd ACOAlpha-tubulin N-acetyltransferase 1 / 0.873
4u9y COAAlpha-tubulin N-acetyltransferase 1 / 0.869
4b5p ACOAlpha-tubulin N-acetyltransferase 1 / 0.862
5kf2 ACOPredicted acetyltransferase / 0.860
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.845
5kf9 ACOPredicted acetyltransferase / 0.843
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.834
5kgh ACOPredicted acetyltransferase / 0.831
4mxe ACON-acetyltransferase ESCO1 2.3.1 0.830
5kgj ACOPredicted acetyltransferase / 0.820
1wwz ACOUncharacterized protein / 0.815
4h6u ACOAlpha-tubulin N-acetyltransferase 1 / 0.813
2bsw CAOProbable acetyltransferase / 0.804
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.791
1n71 COAAac(6')-Ii protein / 0.789
5h84 1VUHistone acetyltransferase KAT2A 2.3.1.48 0.780
2ob0 ACON-alpha-acetyltransferase 50 / 0.776
1kux CA3Serotonin N-acetyltransferase / 0.769
1b87 ACOAac(6')-Ii protein / 0.765
4r3k COAN-alpha-acetyltransferase 2.3.1 0.765
1m1d LYXHAT A1 / 0.764
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.762
1pua COAHAT A1 / 0.761
4h6z ACOAlpha-tubulin N-acetyltransferase 1 / 0.758
3gy9 COAGCN5-related N-acetyltransferase / 0.751
3gya COAGCN5-related N-acetyltransferase / 0.744
2cy2 ACOProbable acetyltransferase / 0.742
2a4n COAAac(6')-Ii protein / 0.739
4cs0 ACOPanD regulatory factor / 0.739
1qsn COAHAT A1 / 0.737
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.737
2x7b COAN-alpha-acetyltransferase 2.3.1 0.734
4kub COAUncharacterized protein / 0.734
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.733
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.732
3r1k COAN-acetyltransferase Eis / 0.731
1kuv CA5Serotonin N-acetyltransferase / 0.726
1mja COAHistone acetyltransferase ESA1 / 0.723
1pu9 COAHAT A1 / 0.722
4crz ACOPanD regulatory factor / 0.722
4u9z COAAlpha-tubulin N-acetyltransferase 1 / 0.719
1fy7 COAHistone acetyltransferase ESA1 / 0.718
3te4 ACODopamine N-acetyltransferase / 0.718
3k9u ACOSpermidine N(1)-acetyltransferase / 0.716
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.716
3exn ACOProbable acetyltransferase / 0.715
2r8v ACOAmino-acid acetyltransferase / 0.714
4gs4 ACOAlpha-tubulin N-acetyltransferase 1 / 0.714
1l0c COTSerotonin N-acetyltransferase / 0.713
1cm0 COAHistone acetyltransferase KAT2B 2.3.1.48 0.712
2rc4 ACOHistone acetyltransferase KAT6A / 0.710
1kuy COTSerotonin N-acetyltransferase / 0.708
1mjb ACOHistone acetyltransferase ESA1 / 0.708
1qsm ACOHistone acetyltransferase HPA2 / 0.708
4ua3 COAN-alpha-acetyltransferase 40 2.3.1 0.707
2ou2 ACOHistone acetyltransferase KAT5 / 0.704
4b5o ACOAlpha-tubulin N-acetyltransferase 1 / 0.704
3pgp ACOUncharacterized protein / 0.703
2zfn ACOHistone acetyltransferase RTT109 2.3.1.48 0.700
2giv ACOHistone acetyltransferase KAT8 / 0.699
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.697
4ava ACOAcetyltransferase Pat 2.3.1 0.695
2y0m ACOHistone acetyltransferase KAT8 / 0.693
2q4v ACODiamine acetyltransferase 2 2.3.1.57 0.691
3d2m COAAmino-acid acetyltransferase / 0.690
3r96 ACOMccE protein / 0.690
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.688
3f8k COAUncharacterized protein / 0.687
3r95 ACOMccE protein / 0.686
5c88 COAN-alpha-acetyltransferase / 0.686
1mj9 COAHistone acetyltransferase ESA1 / 0.685
2fxf ACODiamine acetyltransferase 1 / 0.682
4jwp ACOGCN5-related N-acetyltransferase / 0.681
3cz7 ACOHistone acetyltransferase RTT109 2.3.1.48 0.680
2jdd ACOProbable acetyltransferase / 0.679
2b58 COADiamine acetyltransferase 1 / 0.676
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.676
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.674
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.672
2b3v ACODiamine acetyltransferase 1 / 0.671
1p0h ACOMycothiol acetyltransferase 2.3.1.189 0.668
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.665
5kf1 COAPredicted acetyltransferase / 0.664
1qsr ACOHAT A1 / 0.658
1cjw COTSerotonin N-acetyltransferase / 0.656
4xnh ACON-terminal acetyltransferase A complex subunit NAT5 2.3.1 0.656
3d2p COAAmino-acid acetyltransferase / 0.655
1j4j ACOAcetyltransferase 2.3.1 0.653
2jdc CAOProbable acetyltransferase / 0.652