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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4gss GTX Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4gss GTXGlutathione S-transferase P 2.5.1.18 1.243
17gs GTXGlutathione S-transferase P 2.5.1.18 1.196
9gss GTXGlutathione S-transferase P 2.5.1.18 1.187
12gs 0HHGlutathione S-transferase P 2.5.1.18 1.037
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.999
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.992
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.970
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.953
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.885
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.879
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.877
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.876
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.850
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.843
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.837
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.836
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.833
1gss LEEGlutathione S-transferase P 2.5.1.18 0.828
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.764
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.757
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.750
1q4j GTXGlutathione S-transferase 2.5.1.18 0.740
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.705
2aaw GTXGlutathione S-transferase 2.5.1.18 0.700
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.691
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.686
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.679
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.666
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.666
1c72 EPYGlutathione S-transferase 2 2.5.1.18 0.659