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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4fvy H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.933
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.927
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.926
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.924
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.924
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.922
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.921
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.910
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.910
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.910
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.909
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.908
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.907
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.907
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.906
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.905
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.904
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.902
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.901
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.900
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.894
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.894
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.892
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.892
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.892
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.892
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.892
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.891
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.891
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.891
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.891
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.890
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.890
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.890
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.888
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.887
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.883
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.880
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.877
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.876
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.876
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.875
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.873
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.872
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.871
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.871
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.871
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.870
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.870
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.869
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.867
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.866
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.866
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.863
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.857
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.855
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.853
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.852
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.847
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.846
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.843
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.843
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.841
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.837
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.834
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.831
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.826
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.826
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.812
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.806
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.795
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.792
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.791
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.778
3png H4BNitric oxide synthase, brain 1.14.13.39 0.774
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.769
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.764
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.758
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.744
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.721
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.715
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.703
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.700
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.696
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.686
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.679
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.654