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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ftu 7HK Serine/threonine-protein kinase Chk1 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4ftu 7HKSerine/threonine-protein kinase Chk1 2.7.11.1 0.956
4ftr 5HKSerine/threonine-protein kinase Chk1 2.7.11.1 0.845
4ft0 HK9Serine/threonine-protein kinase Chk1 2.7.11.1 0.825
4gh2 HK0Serine/threonine-protein kinase Chk1 2.7.11.1 0.814
4fsy HK7Serine/threonine-protein kinase Chk1 2.7.11.1 0.805
4ftt 6HKSerine/threonine-protein kinase Chk1 2.7.11.1 0.793
4fsz HK8Serine/threonine-protein kinase Chk1 2.7.11.1 0.788
4bib IEOMitogen-activated protein kinase kinase kinase 5 2.7.11.25 0.706
4eut BX7Serine/threonine-protein kinase TBK1 2.7.11.1 0.658
3tki S25Serine/threonine-protein kinase Chk1 2.7.11.1 0.656
1yvj 4STTyrosine-protein kinase JAK3 2.7.10.2 0.652