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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ft9 H4K Serine/threonine-protein kinase Chk1 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4ft9 H4KSerine/threonine-protein kinase Chk1 2.7.11.1 0.806
4ftc H6KSerine/threonine-protein kinase Chk1 2.7.11.1 0.726
4ft7 H3KSerine/threonine-protein kinase Chk1 2.7.11.1 0.725
4ft3 H1KSerine/threonine-protein kinase Chk1 2.7.11.1 0.717
2e9v 85ASerine/threonine-protein kinase Chk1 2.7.11.1 0.701
2ym8 YM8Serine/threonine-protein kinase Chk1 2.7.11.1 0.685
2e9p 77ASerine/threonine-protein kinase Chk1 2.7.11.1 0.677
3eyh IZATyrosine-protein kinase JAK1 / 0.671
4c2w ANPAurora kinase B-A 2.7.11.1 0.664
4hvh 19RTyrosine-protein kinase JAK3 2.7.10.2 0.658
4ft5 H2KSerine/threonine-protein kinase Chk1 2.7.11.1 0.657