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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4eux HW1 Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.953
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.848
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.806
3n62 XFJNitric oxide synthase, brain 1.14.13.39 0.779
3nlr JRSNitric oxide synthase, brain 1.14.13.39 0.765
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.764
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.762
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.758
3n65 XFJNitric oxide synthase, brain 1.14.13.39 0.757
3n5y XFLNitric oxide synthase, brain 1.14.13.39 0.754
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.754
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.754
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.752
4imt 1EWNitric oxide synthase, brain 1.14.13.39 0.749
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.747
3b3p JI7Nitric oxide synthase, brain 1.14.13.39 0.747
4cx4 HW9Nitric oxide synthase, brain 1.14.13.39 0.747
3nlk JSSNitric oxide synthase, brain 1.14.13.39 0.746
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.745
4jse QJ2Nitric oxide synthase, brain 1.14.13.39 0.744
3n5v XFHNitric oxide synthase, brain 1.14.13.39 0.742
3n5z XFMNitric oxide synthase, brain 1.14.13.39 0.740
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.740
3ufo HW4Nitric oxide synthase, brain 1.14.13.39 0.737
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.737
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.735
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.735
3nlv 3XANitric oxide synthase, brain 1.14.13.39 0.734
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.734
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.732
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.731
3ufv HW9Nitric oxide synthase, brain 1.14.13.39 0.731
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.728
4k5d 1Q6Nitric oxide synthase, brain 1.14.13.39 0.727
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.723
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.722
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.720
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.717
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.714
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.709
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.708
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.707
3uft HW7Nitric oxide synthase, brain 1.14.13.39 0.699
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.698
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.698
3ufw HW0Nitric oxide synthase, brain 1.14.13.39 0.696
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.692
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.692
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.684
3rqm X2ENitric oxide synthase, brain 1.14.13.39 0.684
3ufu HW8Nitric oxide synthase, brain 1.14.13.39 0.683
3jx3 JI5Nitric oxide synthase, brain 1.14.13.39 0.682
3nln JRSNitric oxide synthase, brain 1.14.13.39 0.682
3dqr JI2Nitric oxide synthase, brain 1.14.13.39 0.679
3nnz 59WNitric oxide synthase, brain 1.14.13.39 0.679
3rqj Y2BNitric oxide synthase, brain 1.14.13.39 0.677
3jwt JI5Nitric oxide synthase, brain 1.14.13.39 0.676
3svp JK5Nitric oxide synthase, brain 1.14.13.39 0.676
4lwa Q13Nitric oxide synthase oxygenase 1.14.13.165 0.675
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.673
1m9j CLWNitric oxide synthase, endothelial 1.14.13.39 0.668
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.665
4cx3 HW8Nitric oxide synthase, brain 1.14.13.39 0.662
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.659
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.659
4cx5 HW8Nitric oxide synthase, brain 1.14.13.39 0.655
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.655