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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4eh5 IRG Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4eh5 IRGMitogen-activated protein kinase 14 / 1.089
4eh8 IRGMitogen-activated protein kinase 14 / 1.027
4dli IRGMitogen-activated protein kinase 14 / 0.951
4eh2 IRGMitogen-activated protein kinase 14 / 0.944
4eh3 IRGMitogen-activated protein kinase 14 / 0.903
4eh7 IRGMitogen-activated protein kinase 14 / 0.895
4eh6 IRGMitogen-activated protein kinase 14 / 0.832
4eh9 IRGMitogen-activated protein kinase 14 / 0.805