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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4efu EFU Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4efu EFUHeat shock protein HSP 90-alpha / 1.107
2xjx XJXHeat shock protein HSP 90-alpha / 0.768
1yc3 4BCHeat shock protein HSP 90-alpha / 0.767
3hek BD0Heat shock protein HSP 90-alpha / 0.758
3hhu 819Heat shock protein HSP 90-alpha / 0.752
1yc1 4BCHeat shock protein HSP 90-alpha / 0.738
2yjw YJWHeat shock protein HSP 90-alpha / 0.736
3k98 1RCHeat shock protein HSP 90-alpha / 0.730
2bsm BSMHeat shock protein HSP 90-alpha / 0.719
3k99 PFTHeat shock protein HSP 90-alpha / 0.709
2yec XQ0Heat shock protein HSP 90-alpha / 0.704
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.701
2yi5 YI5Heat shock protein HSP 90-alpha / 0.700
1u0z RDCEndoplasmin / 0.696
4mp7 PFT[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial 2.7.11.2 0.687
4egh 0OYHeat shock protein HSP 90-alpha / 0.671
2iws NP4ATP-dependent molecular chaperone HSP82 / 0.650