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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4d1o H4B Nitric oxide synthase, endothelial 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.903
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.893
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.893
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.892
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.891
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.891
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.890
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.889
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.888
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.886
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.886
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.882
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.881
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.876
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.875
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.874
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.873
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.872
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.872
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.872
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.871
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.871
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.870
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.870
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.869
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.869
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.868
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.866
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.863
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.863
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.857
3png H4BNitric oxide synthase, brain 1.14.13.39 0.856
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.855
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.854
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.854
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.853
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.852
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.852
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.851
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.850
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.849
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.848
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.848
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.845
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.840
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.839
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.839
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.837
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.837
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.836
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.836
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.836
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.835
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.834
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.834
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.834
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.832
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.831
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.830
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.829
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.828
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.824
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.823
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.821
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.819
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.814
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.813
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.811
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.808
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.807
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.805
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.804
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.801
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.787
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.786
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.785
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.784
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.783
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.780
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.779
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.766
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.756
4e5i 0N9Polymerase acidic protein / 0.744
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.711
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.707
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.706
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.706
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.703
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.696
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.664
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.663
4e5f 0N7Polymerase acidic protein / 0.660
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.658
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.656
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.656
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.654