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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4c2p X8Z Angiotensin-converting enzyme 3.2.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4c2p X8ZAngiotensin-converting enzyme 3.2.1 0.875
4ca6 3EFAngiotensin-converting enzyme 3.2.1 0.726
1j37 X8ZAngiotensin-converting enzyme 3.4.15.1 0.716
2xy9 3ESAngiotensin-converting enzyme 3.2.1 0.709
3bkk KAFAngiotensin-converting enzyme 3.2.1 0.696
4ca7 3EFAngiotensin-converting enzyme 3.4.15.1 0.693
2oc2 RX3Angiotensin-converting enzyme 3.2.1 0.691
2x93 X93Angiotensin-converting enzyme 3.4.15.1 0.687
2xyd 3ESAngiotensin-converting enzyme 3.2.1 0.677
2x97 RX4Angiotensin-converting enzyme 3.4.15.1 0.655
1o86 LPRAngiotensin-converting enzyme 3.2.1 0.651