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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bux F35 Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4bux F35Tankyrase-2 2.4.2.30 0.909
4bus 32FTankyrase-2 2.4.2.30 0.898
4but 31FTankyrase-2 2.4.2.30 0.896
4bud 29FTankyrase-2 2.4.2.30 0.892
4buv 16ITankyrase-2 2.4.2.30 0.892
4bu9 08CTankyrase-2 2.4.2.30 0.891
4bue JQFTankyrase-2 2.4.2.30 0.864
4buu F38Tankyrase-2 2.4.2.30 0.858
4buw F33Tankyrase-2 2.4.2.30 0.853
4buf F36Tankyrase-2 2.4.2.30 0.846
4l0s 1UZTankyrase-2 2.4.2.30 0.844
4l34 1VGTankyrase-2 2.4.2.30 0.844
4l09 1URTankyrase-2 2.4.2.30 0.843
4l0t 1V0Tankyrase-2 2.4.2.30 0.843
4l0v 1V1Tankyrase-2 2.4.2.30 0.842
4l10 A63Tankyrase-2 2.4.2.30 0.842
4kzl 20DTankyrase-2 2.4.2.30 0.840
4kzu A73Tankyrase-2 2.4.2.30 0.838
4bs4 A64Tankyrase-2 2.4.2.30 0.831
3kr8 XAVTankyrase-2 2.4.2.30 0.830
5aku 29FTankyrase-2 2.4.2.30 0.829
4bui W2ETankyrase-2 2.4.2.30 0.828
4hlm 16STankyrase-2 2.4.2.30 0.828
4l33 F70Tankyrase-2 2.4.2.30 0.826
4hki FLNTankyrase-2 2.4.2.30 0.825
4hlf 15ZTankyrase-2 2.4.2.30 0.822
4hkk AGITankyrase-2 2.4.2.30 0.821
4l2k 1V8Tankyrase-2 2.4.2.30 0.820
4avw G18Tankyrase-2 2.4.2.30 0.815
4hl5 15WTankyrase-2 2.4.2.30 0.811
4hlg 20BTankyrase-2 2.4.2.30 0.805
4l0i 1UWTankyrase-2 2.4.2.30 0.803
4hlh 20DTankyrase-2 2.4.2.30 0.802
4l2g 1V4Tankyrase-2 2.4.2.30 0.795
4hlk 431Tankyrase-2 2.4.2.30 0.787
4hkn LU2Tankyrase-2 2.4.2.30 0.783
4l2f 1V3Tankyrase-2 2.4.2.30 0.783
4l31 F08Tankyrase-2 2.4.2.30 0.776
4l32 1VFTankyrase-2 2.4.2.30 0.775
4avu LDRTankyrase-2 2.4.2.30 0.772
4hmh F94Tankyrase-2 2.4.2.30 0.765
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.749
4bjb P34Tankyrase-2 2.4.2.30 0.748
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.742
4mt9 2D6Tankyrase-1 2.4.2.30 0.735
4msg 2C6Tankyrase-1 2.4.2.30 0.734
3u9y 09LTankyrase-2 2.4.2.30 0.729
4pnr G18Tankyrase-2 2.4.2.30 0.725
4bjc RPBTankyrase-2 2.4.2.30 0.723
4li6 1XOTankyrase-1 2.4.2.30 0.719
4tjy 3GNTankyrase-2 2.4.2.30 0.715
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.713
4pnm NU1Tankyrase-2 2.4.2.30 0.706
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.703
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.692
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.691
4msk 2C8Tankyrase-1 2.4.2.30 0.691
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.687
4li8 1XQTankyrase-1 2.4.2.30 0.686
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.678
4bj9 UHBTankyrase-2 2.4.2.30 0.677
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.674
5dsy UHBPoly [ADP-ribose] polymerase 2 2.4.2.30 0.674
4f1l 0RYPoly [ADP-ribose] polymerase 14 2.4.2.30 0.672
4j3l AJ5Tankyrase-2 2.4.2.30 0.672
1pax DHQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.671
3l3l L3LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.671
4tkg 09LTankyrase-2 2.4.2.30 0.671
2rcw AAIPoly [ADP-ribose] polymerase 1 2.4.2.30 0.664
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.660
4e5f 0N7Polymerase acidic protein / 0.660
4e5i 0N9Polymerase acidic protein / 0.660
3p0p NNFTankyrase-2 2.4.2.30 0.659
4j21 AJ6Tankyrase-2 2.4.2.30 0.659
4j22 AJ7Tankyrase-2 2.4.2.30 0.658
4tvj 09LPoly [ADP-ribose] polymerase 2 2.4.2.30 0.658
1efy BZCPoly [ADP-ribose] polymerase 1 2.4.2.30 0.655
3q9o NADCholix toxin 2.4.2.36 0.655
5ewk P34Putative secreted protein / 0.655
4iue AJ4Tankyrase-2 2.4.2.30 0.654