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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bs4 A64 Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4bs4 A64Tankyrase-2 2.4.2.30 0.965
4l10 A63Tankyrase-2 2.4.2.30 0.896
3kr8 XAVTankyrase-2 2.4.2.30 0.887
4l0t 1V0Tankyrase-2 2.4.2.30 0.887
4bud 29FTankyrase-2 2.4.2.30 0.877
4l09 1URTankyrase-2 2.4.2.30 0.873
4l34 1VGTankyrase-2 2.4.2.30 0.872
4l0s 1UZTankyrase-2 2.4.2.30 0.869
4kzu A73Tankyrase-2 2.4.2.30 0.868
4buf F36Tankyrase-2 2.4.2.30 0.861
4l0v 1V1Tankyrase-2 2.4.2.30 0.852
4hlm 16STankyrase-2 2.4.2.30 0.851
4l0i 1UWTankyrase-2 2.4.2.30 0.851
4hki FLNTankyrase-2 2.4.2.30 0.850
4bu9 08CTankyrase-2 2.4.2.30 0.849
4bus 32FTankyrase-2 2.4.2.30 0.848
5aku 29FTankyrase-2 2.4.2.30 0.847
4hlf 15ZTankyrase-2 2.4.2.30 0.844
4hlg 20BTankyrase-2 2.4.2.30 0.834
4l33 F70Tankyrase-2 2.4.2.30 0.833
4hlk 431Tankyrase-2 2.4.2.30 0.832
4bux F35Tankyrase-2 2.4.2.30 0.831
4hlh 20DTankyrase-2 2.4.2.30 0.831
4but 31FTankyrase-2 2.4.2.30 0.830
4buv 16ITankyrase-2 2.4.2.30 0.830
4hkk AGITankyrase-2 2.4.2.30 0.825
4hl5 15WTankyrase-2 2.4.2.30 0.816
4l2k 1V8Tankyrase-2 2.4.2.30 0.816
4l32 1VFTankyrase-2 2.4.2.30 0.809
4bue JQFTankyrase-2 2.4.2.30 0.805
4bui W2ETankyrase-2 2.4.2.30 0.803
4buu F38Tankyrase-2 2.4.2.30 0.802
4l2g 1V4Tankyrase-2 2.4.2.30 0.800
4hmh F94Tankyrase-2 2.4.2.30 0.791
4l31 F08Tankyrase-2 2.4.2.30 0.783
4buw F33Tankyrase-2 2.4.2.30 0.778
4hkn LU2Tankyrase-2 2.4.2.30 0.778
4l2f 1V3Tankyrase-2 2.4.2.30 0.761
4avu LDRTankyrase-2 2.4.2.30 0.755
4avw G18Tankyrase-2 2.4.2.30 0.749
4msg 2C6Tankyrase-1 2.4.2.30 0.745
3u9y 09LTankyrase-2 2.4.2.30 0.703
4bjb P34Tankyrase-2 2.4.2.30 0.697
4pnr G18Tankyrase-2 2.4.2.30 0.692
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.689
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.687
3p0p NNFTankyrase-2 2.4.2.30 0.677
4pnm NU1Tankyrase-2 2.4.2.30 0.677
4tjy 3GNTankyrase-2 2.4.2.30 0.674
4bjc RPBTankyrase-2 2.4.2.30 0.673
4msk 2C8Tankyrase-1 2.4.2.30 0.670
2pwu GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.665
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.664
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.664
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.663
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.663
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.661
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.661
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.661
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2puc GUNHTH-type transcriptional repressor PurR / 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5l DBHPolymerase acidic protein / 0.660
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.660
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.659
4krs 1SXTankyrase-1 2.4.2.30 0.659
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.658
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.658
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.658
4hhz 15SPoly [ADP-ribose] polymerase 1 2.4.2.30 0.658
3t11 3T1Gag-Pol polyprotein 3.4.23.16 0.657
4e5f 0N7Polymerase acidic protein / 0.657
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.657
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.650