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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bkj STI Epithelial discoidin domain-containing receptor 1 2.7.10.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4bkj STIEpithelial discoidin domain-containing receptor 1 2.7.10.1 1.260
2e2b 406Tyrosine-protein kinase ABL1 2.7.10.2 0.947
4ckr DI1Epithelial discoidin domain-containing receptor 1 2.7.10.1 0.890
3gvu STIAbelson tyrosine-protein kinase 2 2.7.10.2 0.879
1iep STITyrosine-protein kinase ABL1 2.7.10.2 0.878
2pl0 STITyrosine-protein kinase Lck 2.7.10.2 0.875
3oez STIProto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.859
4r7i STIMacrophage colony-stimulating factor 1 receptor 2.7.10.1 0.839
2oiq STIProto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.829
2hyy STITyrosine-protein kinase ABL1 2.7.10.2 0.815
3kq7 KQ7Mitogen-activated protein kinase 14 / 0.791
3cs9 NILTyrosine-protein kinase ABL1 2.7.10.2 0.768
2hiw 7MPTyrosine-protein kinase ABL1 2.7.10.2 0.738
3bv2 P38Mitogen-activated protein kinase 14 / 0.738
5hid B1ESerine/threonine-protein kinase B-raf 2.7.11.1 0.733
3d83 GK6Mitogen-activated protein kinase 14 / 0.727
3mvl 38PMitogen-activated protein kinase 14 / 0.719
3gfe P37Mitogen-activated protein kinase 14 / 0.718
4i5h G17Mitogen-activated protein kinase 1 2.7.11.24 0.700
4tyj 0LIFibroblast growth factor receptor 4 2.7.10.1 0.689
4aa0 AA0Mitogen-activated protein kinase 14 / 0.670
2bak AQZMitogen-activated protein kinase 14 / 0.668
4a9y AQZMitogen-activated protein kinase 14 / 0.668
3vnt 0JAVascular endothelial growth factor receptor 2 2.7.10.1 0.667
3uvq FS8Mitogen-activated protein kinase 14 / 0.665
4qrc 0LIFibroblast growth factor receptor 4 2.7.10.1 0.661
3o8u BMUMitogen-activated protein kinase 14 / 0.659
1w83 L11Mitogen-activated protein kinase 14 / 0.657
4fc0 0T2Serine/threonine-protein kinase B-raf 2.7.11.1 0.657
2zm1 KSFTyrosine-protein kinase Lck 2.7.10.2 0.656
3o8p BMUMitogen-activated protein kinase 14 / 0.653
4eh6 0ONMitogen-activated protein kinase 14 / 0.653
1x76 697Estrogen receptor beta / 0.651
3oct 1N1Tyrosine-protein kinase BTK 2.7.10.2 0.651