Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4bio | 8XQ | Hypoxia-inducible factor 1-alpha inhibitor | 1.14.11.30 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
4bio | 8XQ | Hypoxia-inducible factor 1-alpha inhibitor | 1.14.11.30 | 0.871 | |
3od4 | 8XQ | Hypoxia-inducible factor 1-alpha inhibitor | 1.14.11.30 | 0.791 | |
4bis | 8HQ | Lysine-specific demethylase 4A | 1.14.11 | 0.694 | |
3pdq | KC6 | Lysine-specific demethylase 4A | 1.14.11 | 0.684 |