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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4b7p 9UN Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4b7p 9UNHeat shock protein HSP 90-alpha / 1.273
4bqj XKLHeat shock protein HSP 90-alpha / 0.940
3eko PYUHeat shock protein HSP 90-alpha / 0.790
2xx4 13IATP-dependent molecular chaperone HSP82 / 0.765
2ye4 2FYHeat shock protein HSP 90-alpha / 0.764
3k98 1RCHeat shock protein HSP 90-alpha / 0.756
2cct 2E1Heat shock protein HSP 90-alpha / 0.755
2iwx M1SATP-dependent molecular chaperone HSP82 / 0.755
4ce1 7FKATP-dependent molecular chaperone HSP82 / 0.753
2xd6 XD6ATP-dependent molecular chaperone HSP82 / 0.752
2xjx XJXHeat shock protein HSP 90-alpha / 0.747
2xab VHDHeat shock protein HSP 90-alpha / 0.746
2uwd 2GGHeat shock protein HSP 90-alpha / 0.742
2xx2 13CATP-dependent molecular chaperone HSP82 / 0.738
4ce2 BO5ATP-dependent molecular chaperone HSP82 / 0.738
1u0z RDCEndoplasmin / 0.727
1qy8 RDIEndoplasmin / 0.722
2gfd RDAEndoplasmin / 0.719
2ccu 2D9Heat shock protein HSP 90-alpha / 0.718
2cgf P2NATP-dependent molecular chaperone HSP82 / 0.714
2vci 2GJHeat shock protein HSP 90-alpha / 0.713
2yjw YJWHeat shock protein HSP 90-alpha / 0.695
2yk2 YJWHeat shock protein HSP 90-alpha / 0.690
4ce3 L4VATP-dependent molecular chaperone HSP82 / 0.689
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.675
3k97 4CDHeat shock protein HSP 90-alpha / 0.669
4jql VJ6Heat shock protein HSP 90-alpha / 0.668
2xx5 13NATP-dependent molecular chaperone HSP82 / 0.662
3c13 EMOCasein kinase II subunit alpha 2.7.11.1 0.658
3inw JZBHeat shock protein HSP 90-alpha / 0.656
4eev L1XHepatocyte growth factor receptor 2.7.10.1 0.656
1uu9 BI33-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.653
1yc4 43PHeat shock protein HSP 90-alpha / 0.653
2iws NP4ATP-dependent molecular chaperone HSP82 / 0.652