scPDB - Distribution of Binding mode Similarity values of 4ajp entry / Site 3

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4ajp	88N	L-lactate dehydrogenase A chain	1.1.1.27

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
4ajp	88N	L-lactate dehydrogenase A chain	1.1.1.27	1.436
4ajo	88N	L-lactate dehydrogenase A chain	1.1.1.27	1.409
4ajn	88V	L-lactate dehydrogenase A chain	1.1.1.27	1.271
4ajj	88R	L-lactate dehydrogenase A chain	1.1.1.27	0.978
4i9h	1E4	L-lactate dehydrogenase A chain	1.1.1.27	0.693
5l3s	GNP	Signal recognition particle receptor FtsY	/	0.658