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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ag7 COA Glucosamine 6-phosphate N-acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4ag7 COAGlucosamine 6-phosphate N-acetyltransferase / 1.327
5kf9 ACOPredicted acetyltransferase / 0.935
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 0.922
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.904
5kgp ACOPredicted acetyltransferase / 0.901
5kgj ACOPredicted acetyltransferase / 0.883
5kf8 ACOPredicted acetyltransferase / 0.879
5kf1 ACOPredicted acetyltransferase / 0.862
5kgh ACOPredicted acetyltransferase / 0.841
1n71 COAAac(6')-Ii protein / 0.840
2a4n COAAac(6')-Ii protein / 0.833
1m4i COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.807
1m4d COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.805
1b87 ACOAac(6')-Ii protein / 0.803
1j4j ACOAcetyltransferase 2.3.1 0.802
2ob0 ACON-alpha-acetyltransferase 50 / 0.802
3tfy COAN-alpha-acetyltransferase 50 2.3.1 0.802
4xnh ACON-terminal acetyltransferase A complex subunit NAT5 2.3.1 0.797
2rc4 ACOHistone acetyltransferase KAT6A / 0.789
1bo4 COAAminoglycoside-(3)-N-acetyltransferase / 0.782
2cnt COARibosomal-protein-alanine acetyltransferase / 0.782
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.780
5h84 1VUHistone acetyltransferase KAT2A 2.3.1.48 0.780
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.779
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.777
5kf2 ACOPredicted acetyltransferase / 0.777
4mxe ACON-acetyltransferase ESCO1 2.3.1 0.775
1kuy COTSerotonin N-acetyltransferase / 0.774
2r8v ACOAmino-acid acetyltransferase / 0.768
1qsm ACOHistone acetyltransferase HPA2 / 0.764
2jdd ACOProbable acetyltransferase / 0.759
4r3k COAN-alpha-acetyltransferase 2.3.1 0.757
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.755
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.754
2vbq BSJAminoglycoside N(6')-acetyltransferase type 1 / 0.753
1s5k COAAminoglycoside N(6')-acetyltransferase type 1 / 0.752
1mjb ACOHistone acetyltransferase ESA1 / 0.751
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.748
1p0h ACOMycothiol acetyltransferase 2.3.1.189 0.747
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.746
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.737
4cry ACOPanD regulatory factor / 0.737
1mj9 COAHistone acetyltransferase ESA1 / 0.735
2ozu ACOHistone acetyltransferase KAT6A / 0.734
1wwz ACOUncharacterized protein / 0.733
1ib1 COTSerotonin N-acetyltransferase / 0.732
3pgp ACOUncharacterized protein / 0.729
2fxf ACODiamine acetyltransferase 1 / 0.727
3gya COAGCN5-related N-acetyltransferase / 0.727
1ghe ACOAcetyltransferase 2.3.1 0.726
2bsw CAOProbable acetyltransferase / 0.726
2jdc CAOProbable acetyltransferase / 0.726
2vqy ACOAAC(6')-Ib / 0.722
2prb COAAminoglycoside 6-N-acetyltransferase type Ib11 / 0.719
3exn ACOProbable acetyltransferase / 0.718
3r1k COAN-acetyltransferase Eis / 0.716
1qsn COAHAT A1 / 0.712
2vxk COAGlucosamine 6-phosphate acetyltransferase, putative / 0.711
1pu9 COAHAT A1 / 0.710
4u9y COAAlpha-tubulin N-acetyltransferase 1 / 0.710
3te4 ACODopamine N-acetyltransferase / 0.709
4h6z ACOAlpha-tubulin N-acetyltransferase 1 / 0.709
2bue COAAAC(6')-Ib / 0.708
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.708
2ou2 ACOHistone acetyltransferase KAT5 / 0.704
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.704
1qsr ACOHAT A1 / 0.703
4crz ACOPanD regulatory factor / 0.703
1kuv CA5Serotonin N-acetyltransferase / 0.701
2jev NHQDiamine acetyltransferase 1 / 0.701
2x7b COAN-alpha-acetyltransferase 2.3.1 0.701
2cy2 ACOProbable acetyltransferase / 0.700
5kf1 COAPredicted acetyltransferase / 0.700
1cm0 COAHistone acetyltransferase KAT2B 2.3.1.48 0.697
1kux CA3Serotonin N-acetyltransferase / 0.691
3gy9 COAGCN5-related N-acetyltransferase / 0.690
3f0a ACOSpermidine N(1)-acetyltransferase / 0.689
4jwp ACOGCN5-related N-acetyltransferase / 0.688
2fiw ACOGCN5-related N-acetyltransferase:Aminotransferase, class-II / 0.687
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.684
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.682
3sxn COAN-acetyltransferase Eis / 0.680
2b3v ACODiamine acetyltransferase 1 / 0.679
3vwd ACOAlpha-tubulin N-acetyltransferase 1 / 0.678
2ge3 ACOProbable acetyltransferase / 0.676
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.676
1mja COAHistone acetyltransferase ESA1 / 0.675
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.673
1v0c ACOAAC(6')-Ib / 0.672
4b5o ACOAlpha-tubulin N-acetyltransferase 1 / 0.672
4ua3 COAN-alpha-acetyltransferase 40 2.3.1 0.666
2zpa ACOtRNA(Met) cytidine acetyltransferase TmcA / 0.663
2psw COAN-alpha-acetyltransferase 50 / 0.662
4u9z COAAlpha-tubulin N-acetyltransferase 1 / 0.662
3bj7 COADiamine acetyltransferase 1 / 0.660
3ubm COAFormyl-CoA:oxalate CoA-transferase / 0.658
5c88 COAN-alpha-acetyltransferase / 0.658
4cs0 ACOPanD regulatory factor / 0.653
1s3z COAAminoglycoside N(6')-acetyltransferase type 1 / 0.651
2giv ACOHistone acetyltransferase KAT8 / 0.651
2y0m ACOHistone acetyltransferase KAT8 / 0.651
2zw5 COABleomycin acetyltransferase / 0.650