Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4afe | GGY | Serine/threonine-protein kinase Nek2 | 2.7.11.1 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
4afe | GGY | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 1.023 | |
4a4x | JUP | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.818 | |
2xnp | WCX | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.751 | |
2xk4 | OL2 | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.721 | |
2wqo | VGK | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.699 | |
2xnm | WGZ | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.697 | |
2xk8 | 5R1 | Serine/threonine-protein kinase Nek2 | 2.7.11.1 | 0.652 |