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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3wow ANP Casein kinase II subunit alpha 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3wow ANPCasein kinase II subunit alpha 2.7.11.1 0.951
5cvf ATPCasein kinase II subunit alpha 2.7.11.1 0.711
5cvh ADPCasein kinase II subunit alpha 2.7.11.1 0.706
3w8q AGSDual specificity mitogen-activated protein kinase kinase 1 2.7.12.2 0.705
3f5u ANPDeath-associated protein kinase 1 2.7.11.1 0.703
1daw ANPCasein kinase II subunit alpha 2.7.11.1 0.702
4dee ADPAurora kinase A 2.7.11.1 0.694
2pyw ADPMethylthioribose kinase 2.7.1.100 0.690
4ysj ADPCalmodulin-like domain protein kinase / 0.686
3nsz ANPCasein kinase II subunit alpha 2.7.11.1 0.685
3oro AGSSerine/threonine protein kinase / 0.682
4jqe ANPCasein kinase II subunit alpha 2.7.11.1 0.682
3t8o ATPRhodopsin kinase / 0.674
3gu7 ADPDeath-associated protein kinase 1 2.7.11.1 0.672
3qc9 ADPRhodopsin kinase / 0.672
4fg7 ATPCalcium/calmodulin-dependent protein kinase type 1 2.7.11.17 0.672
2olc ADPMethylthioribose kinase 2.7.1.100 0.671
1tqm ANPRIO-type serine/threonine-protein kinase Rio2 2.7.11.1 0.668
3c4z ADPRhodopsin kinase / 0.668
1lp4 ANPCasein kinase II subunit alpha 2.7.11.1 0.667
4x6r ATPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.667
3gu5 ANPDeath-associated protein kinase 1 2.7.11.1 0.666
3x2u ATPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.666
4ib3 ADPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.665
1zth ADPRIO-type serine/threonine-protein kinase Rio1 2.7.11.1 0.661
3idb ANPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.661
4wb6 ATPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.661
4xw6 ADPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.661
2vuw 5IDSerine/threonine-protein kinase haspin 2.7.11.1 0.660
3dfc ANPDeath-associated protein kinase 1 2.7.11.1 0.660
4iai ADPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.660
2pui ADPMethylthioribose kinase 2.7.1.100 0.659
2w4j ADPDeath-associated protein kinase 1 2.7.11.1 0.659
3fhi ANPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.659
4hpt ANPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.659
5dt3 ATPAurora kinase A 2.7.11.1 0.659
4iaf ADPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.658
4ii5 ADPCyclin-dependent kinase 2 2.7.11.22 0.658
1mru AGSSerine/threonine-protein kinase PknB 2.7.11.1 0.656
2a19 ANPInterferon-induced, double-stranded RNA-activated protein kinase 2.7.11.1 0.656
3gu6 ADPDeath-associated protein kinase 1 2.7.11.1 0.656
4fi1 ATPCasein kinase II subunit alpha 2.7.11.1 0.656
4mwh ATPCasein kinase II subunit alpha 2.7.11.1 0.656
2qcs ANPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.655
4ckj ADNProto-oncogene tyrosine-protein kinase receptor Ret 2.7.10.1 0.654
4uak ADPSerine/threonine-protein kinase MRCK beta 2.7.11.1 0.654
1q8y ADPSerine/threonine-protein kinase SKY1 2.7.11.1 0.653
3kn5 ANPRibosomal protein S6 kinase alpha-5 2.7.11.1 0.653
4gyi ADPUncharacterized protein / 0.653
5dn3 ATPAurora kinase A 2.7.11.1 0.652
4dh7 ANPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.651
5c03 AGSNon-receptor tyrosine-protein kinase TYK2 2.7.10.2 0.650