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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3v49 PK0 Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3v49 PK0Androgen receptor / 1.083
3v4a PK1Androgen receptor / 0.905
4okw 198Androgen receptor / 0.756
4okx 198Androgen receptor / 0.739
4okb 198Androgen receptor / 0.734
1z95 198Androgen receptor / 0.721
4oil HFTAndrogen receptor / 0.708
4olm 198Androgen receptor / 0.688
4ojb 198Androgen receptor / 0.658