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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ufw H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.920
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.915
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.910
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.909
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.909
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.909
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.907
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.907
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.907
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.907
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.906
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.906
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.905
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.905
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.904
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.903
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.903
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.902
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.901
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.899
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.892
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.890
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.890
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.890
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.889
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.889
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.889
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.888
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.888
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.888
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.887
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.887
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.887
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.886
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.886
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.885
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.884
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.884
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.881
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.881
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.873
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.873
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.872
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.872
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.871
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.868
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.861
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.860
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.856
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.856
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.854
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.854
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.851
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.851
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.851
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.845
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.835
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.834
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.822
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.818
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.818
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.808
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.799
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.798
3png H4BNitric oxide synthase, brain 1.14.13.39 0.796
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.796
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.794
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.788
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.786
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.781
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.779
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.766
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.759
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.751
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.743
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.736
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.721
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.713
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.712
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.710
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.704
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.696
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.693
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.690
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.667
4e5f 0N7Polymerase acidic protein / 0.660
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.659
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.659
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.658