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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ufv H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity
Align
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.918
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.912
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.911
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.911
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.911
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.910
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.910
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.910
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.909
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.909
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.909
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.909
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.909
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.909
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.909
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.908
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.907
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.907
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.906
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.906
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.906
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.905
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.905
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.902
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.894
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.893
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.893
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.893
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.892
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.892
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.892
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.892
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.892
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.892
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.891
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.891
3png H4BNitric oxide synthase, brain 1.14.13.39 0.891
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.891
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.890
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.889
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.889
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.887
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.887
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.886
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.884
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.884
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.882
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.877
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.874
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.874
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.874
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.869
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.864
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.864
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.862
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.859
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.856
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.855
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.855
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.854
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.847
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.845
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.842
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.838
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.837
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.815
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.812
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.807
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.806
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.804
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.802
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.801
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.798
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.798
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.791
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.789
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.785
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.782
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.772
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.755
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.753
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.720
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.715
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.708
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.700
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.699
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.688
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.669
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.663
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.662
4e5f 0N7Polymerase acidic protein / 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.659
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.654
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.652