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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ufs H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.933
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.927
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.926
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.926
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.925
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.920
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.910
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.910
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.908
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.908
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.908
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.906
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.906
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.905
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.904
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.904
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.903
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.901
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.900
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.895
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.893
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.892
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.890
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.889
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.889
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.889
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.888
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.888
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.887
3png H4BNitric oxide synthase, brain 1.14.13.39 0.887
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.887
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.887
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.886
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.886
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.884
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.884
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.880
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.876
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.875
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.874
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.874
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.872
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.869
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.868
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.868
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.867
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.866
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.859
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.859
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.856
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.854
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.854
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.854
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.853
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.852
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.851
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.851
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.849
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.845
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.842
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.837
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.836
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.835
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.833
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.833
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.832
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.829
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.829
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.829
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.825
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.821
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.818
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.818
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.807
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.803
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.796
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.754
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.748
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.743
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.727
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.725
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.694
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.691
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.690
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.685
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.682
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.663
4e5f 0N7Polymerase acidic protein / 0.660
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.650