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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3tyl H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.933
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.888
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.887
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.885
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.883
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.883
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.883
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.883
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.883
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.883
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.880
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.880
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.878
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.875
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.873
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.873
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.871
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.870
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.868
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.868
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.867
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.867
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.867
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.867
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.866
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.866
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.865
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.863
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.863
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.863
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.861
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.861
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.861
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.860
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.860
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.859
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.858
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.855
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.854
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.853
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.852
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.852
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.851
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.851
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.850
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.849
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.848
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.847
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.846
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.843
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.842
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.842
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.841
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.840
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.840
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.839
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.839
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.838
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.836
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.836
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.835
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.835
3png H4BNitric oxide synthase, brain 1.14.13.39 0.835
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.835
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.833
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.832
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.829
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.826
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.825
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.825
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.825
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.822
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.815
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.814
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.811
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.807
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.800
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.786
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.784
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.771
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.770
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.750
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.749
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.747
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.728
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.720
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.719
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.708
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.708
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.707
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.704
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.679
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.669
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.664
4e5f 0N7Polymerase acidic protein / 0.660
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.659