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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ttj JBI Mitogen-activated protein kinase 10 2.7.11.24

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 1.157
3tti KBIMitogen-activated protein kinase 10 2.7.11.24 0.879
3elj GS7Mitogen-activated protein kinase 8 2.7.11.24 0.781
3fi3 JK2Mitogen-activated protein kinase 10 2.7.11.24 0.761
2o2u 738Mitogen-activated protein kinase 10 2.7.11.24 0.749
2b1p AIZMitogen-activated protein kinase 10 2.7.11.24 0.725
2gtn LIEMitogen-activated protein kinase 14 / 0.721
2gtm LIDMitogen-activated protein kinase 14 / 0.712
3fls FLSMitogen-activated protein kinase 14 / 0.708
3fmm XI2Mitogen-activated protein kinase 14 / 0.687
2wip P49Cyclin-dependent kinase 2 2.7.11.22 0.682
2ghm LICMitogen-activated protein kinase 14 / 0.677
3flq 891Mitogen-activated protein kinase 14 / 0.677
2x1n X1NCyclin-dependent kinase 2 2.7.11.22 0.672
2p2h 994Vascular endothelial growth factor receptor 2 2.7.10.1 0.670
3bi6 396Wee1-like protein kinase 2.7.10.2 0.668
3fmh 533Mitogen-activated protein kinase 14 / 0.666
2hzi JINTyrosine-protein kinase ABL1 2.7.10.2 0.665
5bvw 1N1Epithelial discoidin domain-containing receptor 1 2.7.10.1 0.664
3biz 61EWee1-like protein kinase 2.7.10.2 0.657
3uzp 0CKCasein kinase I isoform delta 2.7.11.1 0.657
2y6o 1N1Ephrin type-A receptor 4 2.7.10.1 0.652
1yqj 6NPMitogen-activated protein kinase 14 / 0.650