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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3sbi E90 Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.868
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.808
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.805
3mho J43Carbonic anhydrase 2 4.2.1.1 0.796
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.792
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.789
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.789
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.783
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.782
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.782
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.782
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.781
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.779
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.779
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.776
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.771
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.767
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.767
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.764
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.764
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.762
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.760
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.759
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.758
1okm SABCarbonic anhydrase 2 4.2.1.1 0.758
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.757
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.754
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.753
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.753
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.750
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.750
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.750
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.747
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.746
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.745
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.738
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.734
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.734
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.732
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.731
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.729
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.728
4uov AZMCarbonate dehydratase / 0.727
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.726
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.726
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.725
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.721
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.720
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.720
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.720
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.719
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.716
1okn STBCarbonic anhydrase 2 4.2.1.1 0.713
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.712
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.712
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.710
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.707
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.707
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.707
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.705
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.704
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.703
4xiw AZMCarbonic anhydrase, alpha type / 0.703
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.702
3da2 4MDCarbonic anhydrase 13 4.2.1.1 0.702
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.702
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.701
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.701
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.699
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.699
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.698
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.698
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.698
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.697
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.695
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.695
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.691
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.690
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.689
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.689
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.688
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.684
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.684
3myq E27Carbonic anhydrase 2 4.2.1.1 0.684
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.683
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.682
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.680
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.677
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.676
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.676
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.676
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.675
4kp5 E1FCarbonic anhydrase 12 4.2.1.1 0.673
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.672
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.671
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.671
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.669
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.669
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.668
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.664
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.664
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.663
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.663
2x7t WZBCarbonic anhydrase 2 4.2.1.1 0.662
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.661
4knn E1FCarbonic anhydrase 13 4.2.1.1 0.661
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.660
3bl1 BL1Carbonic anhydrase 2 4.2.1.1 0.658
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.654