Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3rpr 25Z Cyclin-dependent kinase 2 2.7.11.22

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3rpr 25ZCyclin-dependent kinase 2 2.7.11.22 1.075
3r9n Z68Cyclin-dependent kinase 2 2.7.11.22 0.866
3qts X46Cyclin-dependent kinase 2 2.7.11.22 0.853
3r8u Z31Cyclin-dependent kinase 2 2.7.11.22 0.827
3r8v Z62Cyclin-dependent kinase 2 2.7.11.22 0.812
3rah O1ZCyclin-dependent kinase 2 2.7.11.22 0.787
3s00 Z60Cyclin-dependent kinase 2 2.7.11.22 0.741
3s0o 50ZCyclin-dependent kinase 2 2.7.11.22 0.714
3qtz X42Cyclin-dependent kinase 2 2.7.11.22 0.686
3r9d X6BCyclin-dependent kinase 2 2.7.11.22 0.686
3rk9 09ZCyclin-dependent kinase 2 2.7.11.22 0.686
3rjc 06ZCyclin-dependent kinase 2 2.7.11.22 0.682
3rni 21ZCyclin-dependent kinase 2 2.7.11.22 0.678
1w8c N69Cyclin-dependent kinase 2 2.7.11.22 0.677
5csh ATPCasein kinase II subunit alpha 2.7.11.1 0.659
3rpv 26ZCyclin-dependent kinase 2 2.7.11.22 0.651