sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3rha | FDA | Putrescine oxidase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3rha | FDA | Putrescine oxidase | / | 1.620 | |
| 2yg3 | FAD | Putrescine oxidase | / | 1.504 | |
| 2yg6 | FAD | Putrescine oxidase | / | 1.491 | |
| 2yg4 | FAD | Putrescine oxidase | / | 1.484 | |
| 2yg5 | FAD | Putrescine oxidase | / | 1.435 | |
| 2yg7 | FAD | Putrescine oxidase | / | 1.402 | |
| 4fwf | FAD | Lysine-specific histone demethylase 1B | 1 | 1.098 | |
| 4fwe | FAD | Lysine-specific histone demethylase 1B | 1 | 1.083 | |
| 4gus | FAD | Lysine-specific histone demethylase 1B | 1 | 1.079 | |
| 4gut | FAD | Lysine-specific histone demethylase 1B | 1 | 1.064 | |
| 3zdn | FAD | Monoamine oxidase N | 1.4.3.4 | 1.046 | |
| 2vvl | FAD | Monoamine oxidase N | 1.4.3.4 | 1.025 | |
| 2jb2 | FAD | L-amino acid oxidase | / | 0.994 | |
| 2jae | FAD | L-amino acid oxidase | / | 0.991 | |
| 1rsg | FAD | Polyamine oxidase FMS1 | / | 0.983 | |
| 3cnt | FAD | Polyamine oxidase FMS1 | / | 0.978 | |
| 2jb1 | FAD | L-amino acid oxidase | / | 0.977 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.970 | |
| 5g3s | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.957 | |
| 4gur | FAD | Lysine-specific histone demethylase 1B | 1 | 0.949 | |
| 3cn8 | FAD | Polyamine oxidase FMS1 | / | 0.948 | |
| 3nn6 | FB0 | 6-hydroxy-L-nicotine oxidase | / | 0.946 | |
| 4fwj | FAD | Lysine-specific histone demethylase 1B | 1 | 0.941 | |
| 2hko | FAD | Lysine-specific histone demethylase 1A | 1 | 0.940 | |
| 4hsu | FAD | Lysine-specific histone demethylase 1B | 1 | 0.938 | |
| 5g3t | FDA | Flavin-dependent L-tryptophan oxidase VioA | / | 0.933 | |
| 2iid | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.926 | |
| 4guu | FA9 | Lysine-specific histone demethylase 1B | 1 | 0.923 | |
| 2iw5 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.919 | |
| 2dw4 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.913 | |
| 2yr4 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.912 | |
| 2yr5 | FAD | Phenylalanine 2-monooxygenase precursor | 1.13.12.9 | 0.910 | |
| 1h83 | FAD | Polyamine oxidase | 1.5.3.14 | 0.905 | |
| 3cnd | FAD | Polyamine oxidase FMS1 | / | 0.904 | |
| 1h81 | FAD | Polyamine oxidase | 1.5.3.14 | 0.896 | |
| 4gdp | FAD | Polyamine oxidase FMS1 | / | 0.896 | |
| 2e1m | FAD | L-glutamate oxidase | / | 0.892 | |
| 2y48 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.880 | |
| 4i58 | FAD | Cyclohexylamine Oxidase | / | 0.872 | |
| 5l3d | FAD | Lysine-specific histone demethylase 1A | 1 | 0.872 | |
| 2q7v | FAD | Thioredoxin reductase | / | 0.865 | |
| 3bi5 | FAD | Polyamine oxidase FMS1 | / | 0.863 | |
| 2b9x | FAD | Putative aminooxidase | / | 0.860 | |
| 3bi2 | FAD | Polyamine oxidase FMS1 | / | 0.853 | |
| 3qj4 | FAD | Renalase | / | 0.853 | |
| 3r9u | FAD | Thioredoxin reductase | / | 0.852 | |
| 2q0k | FAD | Thioredoxin reductase | 1.8.1.9 | 0.839 | |
| 1z6l | FAD | Polyamine oxidase FMS1 | / | 0.838 | |
| 2uxx | FAJ | Lysine-specific histone demethylase 1A | 1 | 0.838 | |
| 2b9y | FAD | Putative aminooxidase | / | 0.837 | |
| 2bab | FAD | Putative aminooxidase | / | 0.836 | |
| 4ech | FAD | Polyamine oxidase FMS1 | / | 0.834 | |
| 3cge | FAD | Coenzyme A disulfide reductase | / | 0.832 | |
| 4xbf | FAD | Lysine-specific histone demethylase 1A | 1 | 0.831 | |
| 3ab1 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.830 | |
| 4dsg | FAD | Uncharacterized protein | / | 0.829 | |
| 3ish | FAD | Thioredoxin reductase | 1.8.1.9 | 0.828 | |
| 3lzw | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.827 | |
| 2b9w | FAD | Putative aminooxidase | / | 0.814 | |
| 4cnj | FAD | L-amino acid oxidase | / | 0.813 | |
| 1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.811 | |
| 1yy5 | FAD | Polyamine oxidase FMS1 | / | 0.811 | |
| 1ger | FAD | Glutathione reductase | 1.8.1.7 | 0.809 | |
| 3kpf | FAD | Polyamine oxidase | 1.5.3.14 | 0.809 | |
| 2xvi | FAD | Putative flavin-containing monooxygenase | / | 0.808 | |
| 4mih | FAD | Pyranose 2-oxidase | 1.1.3.10 | 0.808 | |
| 4mo2 | FAD | UDP-galactopyranose mutase | / | 0.808 | |
| 1ps9 | FAD | 2,4-dienoyl-CoA reductase | 1.3.1.34 | 0.807 | |
| 3cgd | FAD | Coenzyme A disulfide reductase | / | 0.805 | |
| 3kkj | FAD | Renalase | / | 0.804 | |
| 4gcm | FAD | Thioredoxin reductase | 1.8.1.9 | 0.803 | |
| 5j60 | FAD | Thioredoxin reductase | / | 0.803 | |
| 1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.800 | |
| 4u2s | FDA | Cholesterol oxidase | 1.1.3.6 | 0.800 | |
| 2gr1 | FAD | Ferredoxin reductase | / | 0.799 | |
| 4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.799 | |
| 1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.798 | |
| 2ba9 | FAD | Putative aminooxidase | / | 0.797 | |
| 1n4u | FAE | Cholesterol oxidase | 1.1.3.6 | 0.796 | |
| 1n4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.796 | |
| 2gvc | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.796 | |
| 3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.796 | |
| 3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.796 | |
| 4cnk | FAD | L-amino acid oxidase | / | 0.796 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.795 | |
| 4jdr | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.795 | |
| 4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.795 | |
| 5br7 | FAD | UDP-galactopyranose mutase | / | 0.794 | |
| 1wam | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.792 | |
| 1f8r | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.791 | |
| 4dsh | FDA | Uncharacterized protein | / | 0.789 | |
| 2nvk | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.787 | |
| 4u8p | FDA | UDP-galactopyranose mutase | / | 0.786 | |
| 4xwz | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.786 | |
| 3cgc | FAD | Coenzyme A disulfide reductase | / | 0.785 | |
| 5fs9 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.785 | |
| 3kyb | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.784 | |
| 1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.783 | |
| 2xve | FAD | Putative flavin-containing monooxygenase | / | 0.783 | |
| 3gyj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.783 | |
| 3rnm | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.783 | |
| 3ukk | FDA | UDP-galactopyranose mutase | / | 0.782 | |
| 2yvf | FAD | Ferredoxin reductase | / | 0.781 | |
| 3f8d | FAD | NADH oxidase/thioredoxin reductase | / | 0.780 | |
| 1cf3 | FAD | Glucose oxidase | 1.1.3.4 | 0.779 | |
| 4wct | FAD | Fructosyl amine:oxygen oxidoreductase | / | 0.779 | |
| 3ad9 | FAD | Subunit beta of sarcosine oxidase | / | 0.777 | |
| 3pl8 | FAD | Pyranose 2-oxidase | / | 0.777 | |
| 4u8m | FDA | UDP-galactopyranose mutase | / | 0.777 | |
| 1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.776 | |
| 1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.776 | |
| 3kve | FAD | L-amino-acid oxidase | / | 0.776 | |
| 2ign | FAD | Pyranose 2-oxidase | / | 0.775 | |
| 4lii | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.775 | |
| 3ict | FAD | Coenzyme A disulfide reductase | / | 0.774 | |
| 4h4s | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.774 | |
| 3qvr | FAD | Glucose oxidase | 1.1.3.4 | 0.773 | |
| 4u8i | FDA | UDP-galactopyranose mutase | / | 0.773 | |
| 1tde | FAD | Thioredoxin reductase | 1.8.1.9 | 0.772 | |
| 3k7t | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.772 | |
| 3lsh | FAD | Pyranose 2-oxidase | / | 0.771 | |
| 3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.770 | |
| 2bac | FAD | Putative aminooxidase | / | 0.768 | |
| 3nt6 | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.768 | |
| 3cox | FAD | Cholesterol oxidase | 1.1.3.6 | 0.767 | |
| 1ijh | FAD | Cholesterol oxidase | 1.1.3.6 | 0.766 | |
| 1pdh | FAS | p-hydroxybenzoate hydroxylase | / | 0.766 | |
| 2gr0 | FAD | Ferredoxin reductase | / | 0.766 | |
| 3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.765 | |
| 2h94 | FAD | Lysine-specific histone demethylase 1A | 1 | 0.764 | |
| 4bv6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.763 | |
| 4ocg | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.763 | |
| 4u2l | SFD | Cholesterol oxidase | 1.1.3.6 | 0.763 | |
| 3ka7 | FAD | Putative oxidoreductase | / | 0.761 | |
| 3nta | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.761 | |
| 4o5q | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.761 | |
| 1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.760 | |
| 3cty | FAD | Probable thioredoxin reductase | / | 0.760 | |
| 3nlc | FAD | Uncharacterized protein | / | 0.760 | |
| 3utf | FDA | UDP-galactopyranose mutase | / | 0.760 | |
| 3ukf | FDA | UDP-galactopyranose mutase | / | 0.759 | |
| 2zzc | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.758 | |
| 4h4u | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.758 | |
| 4o5u | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.758 | |
| 1ju2 | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.757 | |
| 5fs8 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.757 | |
| 3lsi | FAD | Pyranose 2-oxidase | / | 0.756 | |
| 3uov | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.756 | |
| 4qi5 | FAD | Cellobiose dehydrogenase | / | 0.756 | |
| 3gdp | FAD | (R)-mandelonitrile lyase 2 | 4.1.2.10 | 0.755 | |
| 1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.754 | |
| 1d7y | FAD | Ferredoxin reductase | / | 0.754 | |
| 5fs7 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.754 | |
| 4z26 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.753 | |
| 4u8k | FDA | UDP-galactopyranose mutase | / | 0.752 | |
| 2gh5 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.751 | |
| 2vou | FAD | 2,6-dihydroxypyridine 3-monooxygenase | 1.14.13.10 | 0.751 | |
| 3dh9 | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.751 | |
| 3lsm | SFD | Pyranose 2-oxidase | / | 0.751 | |
| 1fec | FAD | Trypanothione reductase | 1.8.1.12 | 0.750 | |
| 1trb | FAD | Thioredoxin reductase | 1.8.1.9 | 0.750 | |
| 4h4y | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.750 | |
| 2f5z | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.749 | |
| 2gmh | FAD | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial | 1.5.5.1 | 0.749 | |
| 3t37 | FAD | Pyridoxine 4-oxidase | / | 0.749 | |
| 2xvf | FAD | Putative flavin-containing monooxygenase | / | 0.748 | |
| 1gxf | FAD | Trypanothione reductase | 1.8.1.12 | 0.747 | |
| 4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.747 | |
| 4a65 | FAD | Thioredoxin reductase | / | 0.746 | |
| 1rp0 | AHZ | Thiamine thiazole synthase, chloroplastic | / | 0.745 | |
| 2bry | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.743 | |
| 4b65 | FAD | L-ornithine N(5)-monooxygenase | / | 0.743 | |
| 4j57 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.743 | |
| 4rsl | FAD | Fructosyl peptide oxidase | / | 0.743 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.742 | |
| 4udq | FAD | 5-(hydroxymethyl)furfural oxidase | / | 0.742 | |
| 1xpq | FAD | Polyamine oxidase FMS1 | / | 0.741 | |
| 1d4c | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.740 | |
| 2gv8 | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.740 | |
| 2xvh | FAD | Putative flavin-containing monooxygenase | / | 0.740 | |
| 4gde | FDA | UDP-galactopyranose mutase | / | 0.740 | |
| 1tdf | FAD | Thioredoxin reductase | 1.8.1.9 | 0.739 | |
| 1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.738 | |
| 2xlp | FAD | Putative flavin-containing monooxygenase | / | 0.738 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.738 | |
| 4ykf | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.738 | |
| 1f8s | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.736 | |
| 4ykg | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.735 | |
| 2cvj | FAD | Thioredoxin reductase related protein | / | 0.734 | |
| 3djj | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.734 | |
| 3nyc | FAD | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.734 | |
| 3t2z | FAD | Sulfide-quinone reductase | / | 0.734 | |
| 4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.734 | |
| 4jnq | FDA | Thioredoxin reductase | / | 0.734 | |
| 5fs6 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.734 | |
| 2rab | FAD | Glutathione amide reductase | / | 0.733 | |
| 3utg | FDA | UDP-galactopyranose mutase | / | 0.733 | |
| 4d03 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.733 | |
| 4hb9 | FAD | Uncharacterized protein | / | 0.731 | |
| 1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.730 | |
| 4wx1 | FDA | UDP-galactopyranose mutase | / | 0.730 | |
| 1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.729 | |
| 1f8w | FAD | NADH peroxidase | 1.11.1.1 | 0.728 | |
| 1gpe | FAD | Glucose oxidase | 1.1.3.4 | 0.728 | |
| 4opl | FDA | Conserved Archaeal protein | / | 0.728 | |
| 4ynt | FDA | Glucose oxidase, putative | / | 0.728 | |
| 1bzl | FAD | Trypanothione reductase | 1.8.1.12 | 0.727 | |
| 1mxt | FAE | Cholesterol oxidase | 1.1.3.6 | 0.727 | |
| 1n1p | FAD | Cholesterol oxidase | 1.1.3.6 | 0.727 | |
| 1n4w | FAD | Cholesterol oxidase | 1.1.3.6 | 0.727 | |
| 1v0j | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.727 | |
| 1y56 | ATP | Uncharacterized protein | / | 0.727 | |
| 4b68 | FAD | L-ornithine N(5)-monooxygenase | / | 0.727 | |
| 4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.727 | |
| 4xxg | FAD | Cholesterol oxidase | 1.1.3.6 | 0.727 | |
| 2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.726 | |
| 2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.726 | |
| 4a5l | FAD | Thioredoxin reductase | / | 0.726 | |
| 4j56 | FAD | Thioredoxin reductase 2 | 1.8.1.9 | 0.726 | |
| 1fl2 | FAD | Alkyl hydroperoxide reductase subunit F | 1.8.1 | 0.725 | |
| 4mok | FAD | Pyranose 2-oxidase | / | 0.725 | |
| 4rpg | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.725 | |
| 1y56 | FAD | 382aa long hypothetical sarcosine oxidase | / | 0.724 | |
| 1zk7 | FAD | Mercuric reductase | 1.16.1.1 | 0.724 | |
| 2eq7 | FAD | Dihydrolipoyl dehydrogenase | / | 0.724 | |
| 2vq7 | FAD | Putative flavin-containing monooxygenase | / | 0.724 | |
| 3ntd | FAD | FAD-dependent pyridine nucleotide-disulphide oxidoreductase | / | 0.724 | |
| 4tm1 | FDA | KtzI | / | 0.724 | |
| 2eq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.723 | |
| 2hqm | FAD | Glutathione reductase | 1.8.1.7 | 0.723 | |
| 2eq6 | FAD | Dihydrolipoyl dehydrogenase | / | 0.722 | |
| 3lzx | FAD | Ferredoxin--NADP reductase 2 | 1.18.1.2 | 0.722 | |
| 3bg7 | FAD | Pyranose 2-oxidase | / | 0.721 | |
| 1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.720 | |
| 1zmc | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.720 | |
| 4gap | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.720 | |
| 1mo9 | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.719 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.719 | |
| 3syi | FAD | Sulfide-quinone reductase | / | 0.718 | |
| 4h50 | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.718 | |
| 2q0l | FAD | Thioredoxin reductase | 1.8.1.9 | 0.717 | |
| 3m12 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.717 | |
| 3dgh | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.716 | |
| 3t14 | FAD | Sulfide-quinone reductase | / | 0.716 | |
| 4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.716 | |
| 4up3 | FAD | Thioredoxin reductase | / | 0.716 | |
| 1zx9 | FAD | Mercuric reductase | 1.16.1.1 | 0.715 | |
| 2bra | FAD | [F-actin]-methionine sulfoxide oxidase MICAL1 | 1.14.13 | 0.715 | |
| 4ccq | FAD | Thioredoxin reductase | / | 0.715 | |
| 4jq9 | FAD | Dihydrolipoyl dehydrogenase | / | 0.715 | |
| 4mo2 | FDA | UDP-galactopyranose mutase | / | 0.714 | |
| 2xls | FAD | Putative flavin-containing monooxygenase | / | 0.713 | |
| 3f8r | NAP | NADH oxidase/thioredoxin reductase | / | 0.713 | |
| 3gsi | FAD | Dimethylglycine oxidase | 1.5.3.10 | 0.713 | |
| 5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.713 | |
| 3hdy | FAD | UDP-galactopyranose mutase | / | 0.711 | |
| 3klj | FAD | NADH-rubredoxin oxidoreductase | 1.18.1.1 | 0.710 | |
| 4emw | FAD | Coenzyme A disulfide reductase | / | 0.710 | |
| 4yac | NAI | C alpha-dehydrogenase | / | 0.709 | |
| 2eq8 | FAD | Dihydrolipoyl dehydrogenase | / | 0.708 | |
| 3m13 | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.708 | |
| 4opi | FDA | Conserved Archaeal protein | / | 0.708 | |
| 4u8o | FDA | UDP-galactopyranose mutase | / | 0.708 | |
| 1tdn | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.707 | |
| 3q9t | FAY | Uncharacterized protein | / | 0.707 | |
| 3ukl | FAD | UDP-galactopyranose mutase | / | 0.707 | |
| 4b64 | FAD | L-ornithine N(5)-monooxygenase | / | 0.707 | |
| 3gwf | FAD | Cyclohexanone monooxygenase | / | 0.706 | |
| 4la1 | FAD | Thioredoxin glutathione reductase | / | 0.705 | |
| 1feb | FAD | Trypanothione reductase | 1.8.1.12 | 0.704 | |
| 3qvp | FAD | Glucose oxidase | 1.1.3.4 | 0.704 | |
| 3sqp | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.704 | |
| 4u8l | FDA | UDP-galactopyranose mutase | / | 0.704 | |
| 1ng3 | FAD | Glycine oxidase | 1.4.3.19 | 0.703 | |
| 4bur | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.703 | |
| 4uir | FAD | Oleate hydratase | 4.2.1.53 | 0.703 | |
| 3k4n | FAD | Pyranose 2-oxidase | / | 0.702 | |
| 3lxd | FAD | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | / | 0.702 | |
| 3ukk | FAD | UDP-galactopyranose mutase | / | 0.702 | |
| 2c3d | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.701 | |
| 2eq7 | NAD | Dihydrolipoyl dehydrogenase | / | 0.701 | |
| 5eb5 | FAD | (R)-mandelonitrile lyase 1 | 4.1.2.10 | 0.701 | |
| 1v59 | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.700 | |
| 2qae | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.700 | |
| 3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.700 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.700 | |
| 4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.700 | |
| 4g73 | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.700 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.699 | |
| 3up5 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.699 | |
| 4tlz | FAD | KtzI | / | 0.699 | |
| 1ryi | FAD | Glycine oxidase | 1.4.3.19 | 0.698 | |
| 1w4x | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.698 | |
| 2zz0 | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.698 | |
| 3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.698 | |
| 1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.697 | |
| 3ad9 | NAD | Subunit alpha of sarocosine oxidase | / | 0.697 | |
| 3ef6 | FAD | Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component | 1.18.1.3 | 0.697 | |
| 3lov | FAD | Protoporphyrinogen oxidase | / | 0.697 | |
| 1get | FAD | Glutathione reductase | 1.8.1.7 | 0.696 | |
| 1jki | NAI | Inositol-3-phosphate synthase | 5.5.1.4 | 0.696 | |
| 3dk8 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.696 | |
| 4at0 | FAD | Possible succinate dehydrogenase | / | 0.696 | |
| 2tpr | FAD | Trypanothione reductase | 1.8.1.12 | 0.695 | |
| 3axb | FAD | Putative oxidoreductase | / | 0.695 | |
| 1c0k | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.694 | |
| 2r9z | FAD | Glutathione amide reductase | / | 0.694 | |
| 2tmd | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.694 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.694 | |
| 3sz0 | FAD | Sulfide-quinone reductase | / | 0.694 | |
| 4a99 | FAD | TetX family tetracycline inactivation enzyme | / | 0.694 | |
| 1joa | FAD | NADH peroxidase | 1.11.1.1 | 0.693 | |
| 1zmd | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.693 | |
| 2ard | FDA | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.693 | |
| 2fje | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.693 | |
| 2wba | FAD | Trypanothione reductase | 1.8.1.12 | 0.693 | |
| 3ean | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.693 | |
| 3rp8 | FAD | FAD-dependent urate hydroxylase | / | 0.693 | |
| 4eqw | FAD | Coenzyme A disulfide reductase | / | 0.693 | |
| 4eqx | FAD | Coenzyme A disulfide reductase | / | 0.693 | |
| 1d4d | FAD | Fumarate reductase flavoprotein subunit | 1.3.5.4 | 0.692 | |
| 3hdy | FDA | UDP-galactopyranose mutase | / | 0.692 | |
| 2cfy | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.691 | |
| 2x3n | FAD | Probable FAD-dependent monooxygenase | / | 0.691 | |
| 2ylz | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.691 | |
| 3uoy | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.691 | |
| 3urh | FAD | Dihydrolipoyl dehydrogenase | / | 0.691 | |
| 1jnr | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.690 | |
| 4u8n | FDA | UDP-galactopyranose mutase | / | 0.690 | |
| 4g9k | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.689 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.689 | |
| 1hyh | NAD | L-2-hydroxyisocaproate dehydrogenase | / | 0.688 | |
| 3gd3 | FAD | Apoptosis-inducing factor 1, mitochondrial | 1.1.1 | 0.688 | |
| 3he3 | FAD | UDP-galactopyranose mutase | / | 0.688 | |
| 3pvc | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.688 | |
| 4jn9 | FAD | DepH | / | 0.688 | |
| 4u8j | FDA | UDP-galactopyranose mutase | / | 0.688 | |
| 3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.687 | |
| 4h4q | FAD | Biphenyl dioxygenase ferredoxin reductase subunit | / | 0.687 | |
| 2zbw | FAD | Ferredoxin--NADP reductase | / | 0.686 | |
| 1grg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.685 | |
| 1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.685 | |
| 4ap1 | FAD | Steroid monooxygenase | / | 0.685 | |
| 3ept | FDA | Putative FAD-monooxygenase | / | 0.684 | |
| 3sgl | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | / | 0.684 | |
| 1gre | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.683 | |
| 1reo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.683 | |
| 2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.683 | |
| 3lb8 | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.683 | |
| 4b63 | FAD | L-ornithine N(5)-monooxygenase | / | 0.683 | |
| 4g6h | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.683 | |
| 5hsa | FAS | Alcohol oxidase 1 | 1.1.3.13 | 0.682 | |
| 1djn | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.681 | |
| 1i8t | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.681 | |
| 3int | FDA | UDP-galactopyranose mutase | 5.4.99.9 | 0.681 | |
| 3awi | FAD | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | 1.5 | 0.680 | |
| 3dk9 | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.680 | |
| 3uth | FDA | UDP-galactopyranose mutase | / | 0.680 | |
| 4qi4 | FAD | Cellobiose dehydrogenase | / | 0.680 | |
| 1ng4 | FAD | Glycine oxidase | 1.4.3.19 | 0.679 | |
| 3up4 | FAD | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase | 1.14.13.160 | 0.679 | |
| 4cbq | FAD | Thioredoxin reductase | / | 0.679 | |
| 4eer | FMN | Phototropin-2 | 2.7.11.1 | 0.679 | |
| 1gal | FAD | Glucose oxidase | 1.1.3.4 | 0.678 | |
| 3icr | FAD | Coenzyme A disulfide reductase | / | 0.678 | |
| 3nix | FAD | Flavoprotein/dehydrogenase | / | 0.678 | |
| 4tlx | FDA | KtzI | / | 0.678 | |
| 4tm4 | FDA | KtzI | / | 0.678 | |
| 1c0l | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.677 | |
| 1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.677 | |
| 1yqz | FAD | Coenzyme A disulfide reductase | / | 0.677 | |
| 3in6 | FMN | Uncharacterized protein | / | 0.677 | |
| 4em3 | FAD | Coenzyme A disulfide reductase | / | 0.677 | |
| 2v7g | NAD | Urocanate hydratase | 4.2.1.49 | 0.676 | |
| 3ada | NAD | Subunit alpha of sarocosine oxidase | / | 0.676 | |
| 1lpf | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.675 | |
| 1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.675 | |
| 2isl | FNR | 5,6-dimethylbenzimidazole synthase | 1.13.11.79 | 0.674 | |
| 3m0o | FAD | Monomeric sarcosine oxidase | 1.5.3.1 | 0.674 | |
| 3djg | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.673 | |
| 3uka | FAD | UDP-galactopyranose mutase | / | 0.673 | |
| 4aos | FAD | Steroid monooxygenase | / | 0.673 | |
| 2npx | FAD | NADH peroxidase | 1.11.1.1 | 0.671 | |
| 2w0h | FAD | Trypanothione reductase | / | 0.671 | |
| 4g74 | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.671 | |
| 1cl0 | FAD | Thioredoxin reductase | 1.8.1.9 | 0.670 | |
| 1jnz | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.670 | |
| 1qo8 | FAD | Fumarate reductase flavoprotein subunit | / | 0.670 | |
| 2qcu | FAD | Aerobic glycerol-3-phosphate dehydrogenase | 1.1.5.3 | 0.670 | |
| 1bwc | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.669 | |
| 3vqr | FAD | Putative oxidoreductase | / | 0.669 | |
| 2wp5 | FAD | Trypanothione reductase | / | 0.668 | |
| 2yvg | NAD | Ferredoxin reductase | / | 0.668 | |
| 2ywl | FAD | Thioredoxin reductase related protein | / | 0.668 | |
| 1k0j | FAD | p-hydroxybenzoate hydroxylase | / | 0.667 | |
| 1q1r | FAD | Putidaredoxin reductase | 1.18.1.5 | 0.667 | |
| 1tdo | FAD | L-amino-acid oxidase | 1.4.3.2 | 0.667 | |
| 2yls | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.666 | |
| 3atq | FDA | Conserved Archaeal protein | / | 0.666 | |
| 4rnx | FMN | NADPH dehydrogenase 1 | 1.6.99.1 | 0.666 | |
| 1o94 | ADP | Trimethylamine dehydrogenase | 1.5.8.2 | 0.665 | |
| 2du8 | FAD | D-amino-acid oxidase | 1.4.3.3 | 0.665 | |
| 2whd | FAD | Thioredoxin reductase | / | 0.665 | |
| 4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.665 | |
| 4k5r | FAD | Oxygenase | / | 0.665 | |
| 1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.664 | |
| 2cdu | ADP | NADH oxidase | / | 0.664 | |
| 3itj | FAD | Thioredoxin reductase 1 | 1.8.1.9 | 0.664 | |
| 1nqa | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.663 | |
| 2apg | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.663 | |
| 2fja | FAD | Adenylylsulfate reductase, subunit A (AprA) | / | 0.663 | |
| 1que | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.662 | |
| 2ylt | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.662 | |
| 2yvj | FAD | Ferredoxin reductase | / | 0.662 | |
| 3fg2 | FAD | Putative rubredoxin reductase | / | 0.662 | |
| 4c43 | FAD | Ferredoxin--NADP reductase | 1.18.1.2 | 0.662 | |
| 4eqs | FAD | Coenzyme A disulfide reductase | / | 0.662 | |
| 4g6g | FAD | Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial | 1.6.5.9 | 0.662 | |
| 4ntd | FAD | Thioredoxin reductase | / | 0.662 | |
| 4yry | FAD | Glutamate synthase, beta subunit | / | 0.662 | |
| 1tyt | FAD | Trypanothione reductase | 1.8.1.12 | 0.661 | |
| 2jkc | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.661 | |
| 3ics | FAD | Coenzyme A disulfide reductase | / | 0.661 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.661 | |
| 4aox | FAD | Steroid monooxygenase | / | 0.661 | |
| 2ylr | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.660 | |
| 4em4 | FAD | Coenzyme A disulfide reductase | / | 0.660 | |
| 1xdi | FAD | NAD(P)H dehydrogenase (quinone) | / | 0.659 | |
| 2qa1 | FAD | PgaE | / | 0.659 | |
| 4pyn | SAH | Catechol O-methyltransferase | 2.1.1.6 | 0.659 | |
| 4eqr | FAD | Coenzyme A disulfide reductase | / | 0.658 | |
| 3t2y | FAD | Sulfide-quinone reductase | / | 0.657 | |
| 4bk2 | FAD | Probable salicylate monooxygenase | / | 0.657 | |
| 4c3x | FAD | 3-ketosteroid dehydrogenase | / | 0.657 | |
| 4ees | FMN | Phototropin-2 | 2.7.11.1 | 0.657 | |
| 1geu | FAD | Glutathione reductase | 1.8.1.7 | 0.656 | |
| 1gsn | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.656 | |
| 1zmc | NAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.656 | |
| 3alj | FAD | 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase | / | 0.656 | |
| 3we0 | FAD | Lysine 2-monooxygenase | / | 0.656 | |
| 4cy8 | FDA | 2-hydroxybiphenyl-3-monooxygenase | / | 0.656 | |
| 1b3r | NAD | Adenosylhomocysteinase | 3.3.1.1 | 0.655 | |
| 1fea | FAD | Trypanothione reductase | 1.8.1.12 | 0.655 | |
| 1kbq | FAD | NAD(P)H dehydrogenase [quinone] 1 | 1.6.5.2 | 0.655 | |
| 1kqd | FMN | Oxygen-insensitive NAD(P)H nitroreductase | / | 0.655 | |
| 1typ | FAD | Trypanothione reductase | 1.8.1.12 | 0.655 | |
| 2fsv | NAD | NAD(P) transhydrogenase subunit alpha part 1 | 1.6.1.2 | 0.655 | |
| 2i0z | FAD | NAD(FAD)-utilizing dehydrogenases | / | 0.655 | |
| 2j3n | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.655 | |
| 2pdt | FAD | Vivid PAS protein VVD | / | 0.655 | |
| 3qfb | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.655 | |
| 4d04 | FAD | Phenylacetone monooxygenase | 1.14.13.92 | 0.655 | |
| 4fk1 | FAD | Putative thioredoxin reductase | / | 0.655 | |
| 4tm3 | FAD | KtzI | / | 0.655 | |
| 4yxd | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.655 | |
| 5hhf | FDA | UDP-galactopyranose mutase | / | 0.655 | |
| 1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.654 | |
| 2ji9 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.654 | |
| 2uyh | SAH | Modification methylase HhaI | 2.1.1.37 | 0.654 | |
| 4c3y | FAD | 3-ketosteroid dehydrogenase | / | 0.654 | |
| 4rph | FAD | UDP-galactopyranose mutase | 5.4.99.9 | 0.654 | |
| 2q28 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.653 | |
| 3ou6 | SAM | SAM-dependent methyltransferase | / | 0.653 | |
| 1d7l | RFL | p-hydroxybenzoate hydroxylase | / | 0.652 | |
| 1f3p | FAD | Ferredoxin reductase | / | 0.652 | |
| 1vdc | FAD | Thioredoxin reductase 1, mitochondrial | 1.8.1.9 | 0.651 | |
| 1wg8 | SAM | Ribosomal RNA small subunit methyltransferase H | / | 0.651 | |
| 2gpj | FAD | Siderophore-interacting protein | / | 0.651 | |
| 2pg0 | FAD | Acyl-CoA dehydrogenase | / | 0.651 | |
| 3pft | FMN | Flavin reductase | / | 0.651 | |
| 4dna | FAD | Probable glutathione reductase | / | 0.651 | |
| 4opc | FDA | Conserved Archaeal protein | / | 0.651 | |
| 1um0 | FMN | Chorismate synthase | / | 0.650 | |
| 1x0p | FAD | Tll0078 protein | / | 0.650 | |
| 2xdo | FAD | TetX family tetracycline inactivation enzyme | / | 0.650 | |
| 3ute | FAD | UDP-galactopyranose mutase | / | 0.650 | |
| 4tmc | FMN | Old yellow enzyme | / | 0.650 |