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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3qud N3F Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3qud N3FMitogen-activated protein kinase 14 / 1.124
3roc 29AMitogen-activated protein kinase 14 / 0.776
4l8m F46Mitogen-activated protein kinase 14 / 0.762
3que 3FFMitogen-activated protein kinase 14 / 0.755
3hll I45Mitogen-activated protein kinase 14 / 0.737
3fi3 JK2Mitogen-activated protein kinase 10 2.7.11.24 0.696
3uvq FS8Mitogen-activated protein kinase 14 / 0.695
2qd9 LGFMitogen-activated protein kinase 14 / 0.693
3iw7 IPKMitogen-activated protein kinase 14 / 0.691
2bal PQAMitogen-activated protein kinase 14 / 0.688
3fml FMLMitogen-activated protein kinase 14 / 0.679
1zyj BI5Mitogen-activated protein kinase 14 / 0.676
3mpa SB2Mitogen-activated protein kinase 14 / 0.676
4jr3 KJREpidermal growth factor receptor 2.7.10.1 0.676
3ds6 A17Mitogen-activated protein kinase 14 / 0.673
3p7b P7BMitogen-activated protein kinase 14 / 0.670
3fmm XI2Mitogen-activated protein kinase 14 / 0.665
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
3iw6 PP0Mitogen-activated protein kinase 14 / 0.660
4e5i 0N9Polymerase acidic protein / 0.660
3ken ZZDKinesin-like protein KIF11 / 0.658
1yw2 PGJMitogen-activated protein kinase 14 / 0.656
3kf7 L9GMitogen-activated protein kinase 14 / 0.655
3ql8 X01Cyclin-dependent kinase 2 2.7.11.22 0.652
1m7q DQOMitogen-activated protein kinase 14 / 0.650