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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3qqs 17C Anthranilate phosphoribosyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3qqs 17CAnthranilate phosphoribosyltransferase / 1.065
4ij1 17CAnthranilate phosphoribosyltransferase / 0.872
4gkm 683Anthranilate phosphoribosyltransferase / 0.725
3qsa TA7Anthranilate phosphoribosyltransferase / 0.707
3q9x EMOCasein kinase II subunit alpha 2.7.11.1 0.678
2x23 TCUEnoyl-[acyl-carrier-protein] reductase [NADH] 1.3.1.9 0.660
1n0s FLUBilin-binding protein / 0.655
2eg8 FOTDihydroorotase 3.5.2.3 0.650
2p55 MRADual specificity mitogen-activated protein kinase kinase 1 2.7.12.2 0.650