Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3qfv | NM7 | Serine/threonine-protein kinase MRCK beta | 2.7.11.1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3qfv | NM7 | Serine/threonine-protein kinase MRCK beta | 2.7.11.1 | 0.788 | |
| 1g7u | PEP | 2-dehydro-3-deoxyphosphooctonate aldolase | 2.5.1.55 | 0.744 | |
| 4e5i | 0N9 | Polymerase acidic protein | / | 0.744 | |
| 1vhz | APR | ADP compounds hydrolase NudE | 3.6.1 | 0.663 | |
| 2z7l | S91 | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.651 |