scPDB - Distribution of Binding mode Similarity values of 3q8x entry / Site 1

Distribution of Interaction pattern similarity measured by Grim

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Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3q8x	UD1	Toxin zeta

Complex with similar interaction patterns:

PDB ID	HET	Uniprot Name	EC Number	Binding Mode Similarity
3q8x	UD1	Toxin zeta	/	0.997
4emy	PLP	Aminotransferase class I and II	/	0.659
1toi	HCI	Aspartate aminotransferase	2.6.1.1	0.655
4m3t	ATP	DNA-directed DNA polymerase	/	0.653