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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3pls ANP Macrophage-stimulating protein receptor 2.7.10.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3pls ANPMacrophage-stimulating protein receptor 2.7.10.1 0.930
2w5b AGSSerine/threonine-protein kinase Nek2 2.7.11.1 0.715
4cki ADNProto-oncogene tyrosine-protein kinase receptor Ret 2.7.10.1 0.681
2pvr ANPCasein kinase II subunit alpha 2.7.11.1 0.680
4pl4 ADPSerine/threonine-protein kinase/endoribonuclease IRE1 2.7.11.1 0.672
3uim ANPBRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 2.7.10.1 0.671
3lmg ANPReceptor tyrosine-protein kinase erbB-3 2.7.10.1 0.667
4m69 ANPReceptor-interacting serine/threonine-protein kinase 3 2.7.11.1 0.663
1e1v CMGCyclin-dependent kinase 2 2.7.11.22 0.662
4bl1 ANPMaternal embryonic leucine zipper kinase 2.7.11.1 0.657
2gs7 ANPEpidermal growth factor receptor 2.7.10.1 0.656
2vwi ANPSerine/threonine-protein kinase OSR1 2.7.11.1 0.656
3lct ADPALK tyrosine kinase receptor 2.7.10.1 0.655
2ijm ADPFocal adhesion kinase 1 2.7.10.2 0.653
1ny3 ADPMAP kinase-activated protein kinase 2 2.7.11.1 0.651
2qoc ANPEphrin type-A receptor 3 2.7.10.1 0.650