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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3pjc PJC Tyrosine-protein kinase JAK3 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3pjc PJCTyrosine-protein kinase JAK3 2.7.10.2 1.030
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
2ow3 BIMGlycogen synthase kinase-3 beta 2.7.11.26 0.706
3iw4 LW4Protein kinase C alpha type 2.7.11.13 0.706
2cgw 3C3Serine/threonine-protein kinase Chk1 2.7.11.1 0.676
4e5f 0N7Polymerase acidic protein / 0.660
2z7q ACPRibosomal protein S6 kinase alpha-1 2.7.11.1 0.659
2jed LG8Protein kinase C theta type 2.7.11.13 0.655
2i0e PDSProtein kinase C beta type 2.7.11.13 0.651
1x8b 824Wee1-like protein kinase 2.7.10.2 0.650