sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3ogk | OGK | Coronatine-insensitive protein 1 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3ogk | OGK | Coronatine-insensitive protein 1 | / | 1.273 | |
| 1x1d | SAH | C-20 methyltransferase | / | 0.681 | |
| 1njs | KEU | Trifunctional purine biosynthetic protein adenosine-3 | 2.1.2.2 | 0.675 | |
| 3fkl | FKL | Mitogen-activated protein kinase 14 | / | 0.661 | |
| 1x1a | SAM | C-20 methyltransferase | / | 0.658 | |
| 3e92 | G6A | Mitogen-activated protein kinase 14 | / | 0.657 | |
| 1opm | IYG | Peptidyl-glycine alpha-amidating monooxygenase | 1.14.17.3 | 0.653 |