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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3oez STI Proto-oncogene tyrosine-protein kinase Src 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3oez STIProto-oncogene tyrosine-protein kinase Src 2.7.10.2 1.175
2oiq STIProto-oncogene tyrosine-protein kinase Src 2.7.10.2 1.050
3gvu STIAbelson tyrosine-protein kinase 2 2.7.10.2 1.001
1iep STITyrosine-protein kinase ABL1 2.7.10.2 0.979
2hyy STITyrosine-protein kinase ABL1 2.7.10.2 0.963
2e2b 406Tyrosine-protein kinase ABL1 2.7.10.2 0.942
2pl0 STITyrosine-protein kinase Lck 2.7.10.2 0.871
4bkj STIEpithelial discoidin domain-containing receptor 1 2.7.10.1 0.859
4r7i STIMacrophage colony-stimulating factor 1 receptor 2.7.10.1 0.856
3cs9 NILTyrosine-protein kinase ABL1 2.7.10.2 0.829
2hiw 7MPTyrosine-protein kinase ABL1 2.7.10.2 0.792
3bv3 P39Mitogen-activated protein kinase 14 / 0.737
3kq7 KQ7Mitogen-activated protein kinase 14 / 0.715
4ckr DI1Epithelial discoidin domain-containing receptor 1 2.7.10.1 0.707
3be2 RAJVascular endothelial growth factor receptor 2 2.7.10.1 0.681
4uxq 0LIFibroblast growth factor receptor 4 2.7.10.1 0.680
2og8 1N8Tyrosine-protein kinase Lck 2.7.10.2 0.678
3bx5 304Mitogen-activated protein kinase 14 / 0.674
3gfe P37Mitogen-activated protein kinase 14 / 0.671
2y6o 1N1Ephrin type-A receptor 4 2.7.10.1 0.657
5bvw 1N1Epithelial discoidin domain-containing receptor 1 2.7.10.1 0.656
3itz P66Mitogen-activated protein kinase 14 / 0.651
3ocg OCGMitogen-activated protein kinase 14 / 0.651