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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3o8u BMU Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3o8u BMUMitogen-activated protein kinase 14 / 1.129
1w82 L10Mitogen-activated protein kinase 14 / 0.901
3p79 P79Mitogen-activated protein kinase 14 / 0.886
3o8t BMUMitogen-activated protein kinase 14 / 0.836
1kv1 BMUMitogen-activated protein kinase 14 / 0.833
3oc1 BMUMitogen-activated protein kinase 14 / 0.830
3uvr 06FMitogen-activated protein kinase 14 / 0.810
3p5k P5KMitogen-activated protein kinase 14 / 0.797
3p7b P7BMitogen-activated protein kinase 14 / 0.797
3hv4 L51Mitogen-activated protein kinase 14 / 0.795
3gcs BAXMitogen-activated protein kinase 14 / 0.782
3o8p BMUMitogen-activated protein kinase 14 / 0.769
1wbn L09Mitogen-activated protein kinase 14 / 0.763
4eyj N61Mitogen-activated protein kinase 13 2.7.11.24 0.759
3p7c P7CMitogen-activated protein kinase 14 / 0.757
3hv3 R49Mitogen-activated protein kinase 14 / 0.752
4e5i 0N9Polymerase acidic protein / 0.744
3nnx EDDMitogen-activated protein kinase 14 / 0.740
3npc B96Mitogen-activated protein kinase 9 2.7.11.24 0.739
3hv7 1AUMitogen-activated protein kinase 14 / 0.710
3lfe Z84Mitogen-activated protein kinase 14 / 0.707
3hv5 R24Mitogen-activated protein kinase 14 / 0.706
2yis YISMitogen-activated protein kinase 14 / 0.704
3bv2 P38Mitogen-activated protein kinase 14 / 0.702
1wbt WBTMitogen-activated protein kinase 14 / 0.700
3bv3 P39Mitogen-activated protein kinase 14 / 0.700
4f6w 0SSCyclin-dependent kinase 8 2.7.11.22 0.698
4f6s 0SQCyclin-dependent kinase 8 2.7.11.22 0.696
1w83 L11Mitogen-activated protein kinase 14 / 0.688
2puu G2GMitogen-activated protein kinase 14 / 0.684
4asd BAXVascular endothelial growth factor receptor 2 2.7.10.1 0.682
4f7n 0SVCyclin-dependent kinase 8 2.7.11.22 0.682
3qri 919Tyrosine-protein kinase ABL1 2.7.10.2 0.681
4f7j 0SUCyclin-dependent kinase 8 2.7.11.22 0.680
3wze BAXVascular endothelial growth factor receptor 2 2.7.10.1 0.679
1wbv LI3Mitogen-activated protein kinase 14 / 0.676
3gcu R48Mitogen-activated protein kinase 14 / 0.675
4neu Q1AReceptor-interacting serine/threonine-protein kinase 1 2.7.11.1 0.675
5hid B1ESerine/threonine-protein kinase B-raf 2.7.11.1 0.675
3nnw EDDMitogen-activated protein kinase 14 / 0.674
3uvq FS8Mitogen-activated protein kinase 14 / 0.674
3lfb Z87Mitogen-activated protein kinase 14 / 0.672
3ugc 046Tyrosine-protein kinase JAK2 / 0.671
3fzs B96Protein-tyrosine kinase 2-beta 2.7.10.2 0.670
3d83 GK6Mitogen-activated protein kinase 14 / 0.665
2yiw YIWMitogen-activated protein kinase 14 / 0.662
4bkj STIEpithelial discoidin domain-containing receptor 1 2.7.10.1 0.659
1wbs LI2Mitogen-activated protein kinase 14 / 0.658
4ase AV9Vascular endothelial growth factor receptor 2 2.7.10.1 0.657
3gcv SS6Mitogen-activated protein kinase 14 / 0.656
4f7l 0SOCyclin-dependent kinase 8 2.7.11.22 0.656
3fzt 4JZProtein-tyrosine kinase 2-beta 2.7.10.2 0.653
4twn B96Ephrin type-A receptor 3 2.7.10.1 0.653
2rg5 279Mitogen-activated protein kinase 14 / 0.652
5hi2 BAXSerine/threonine-protein kinase B-raf 2.7.11.1 0.650