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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nww 3NW Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3nww 3NWMitogen-activated protein kinase 14 / 1.153
2yix YIXMitogen-activated protein kinase 14 / 0.752
2yiw YIWMitogen-activated protein kinase 14 / 0.718
2yis YISMitogen-activated protein kinase 14 / 0.716
3fkn FKNMitogen-activated protein kinase 14 / 0.710
3nnx EDDMitogen-activated protein kinase 14 / 0.694
2puu G2GMitogen-activated protein kinase 14 / 0.688
3p5k P5KMitogen-activated protein kinase 14 / 0.688
3p7a P7AMitogen-activated protein kinase 14 / 0.682
3dt1 P40Mitogen-activated protein kinase 14 / 0.674
3flz FLZMitogen-activated protein kinase 14 / 0.663
1w82 L10Mitogen-activated protein kinase 14 / 0.662
3fmk FMKMitogen-activated protein kinase 14 / 0.662
3roc 29AMitogen-activated protein kinase 14 / 0.660
3fly FLYMitogen-activated protein kinase 14 / 0.659
4loo SB4Mitogen-activated protein kinase 14 / 0.658
3flw FLWMitogen-activated protein kinase 14 / 0.656
3nnu EDBMitogen-activated protein kinase 14 / 0.651
3npc B96Mitogen-activated protein kinase 9 2.7.11.24 0.651