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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nnu EDB Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3nnu EDBMitogen-activated protein kinase 14 / 1.092
3nnw EDDMitogen-activated protein kinase 14 / 0.957
3nnx EDDMitogen-activated protein kinase 14 / 0.945
3hv7 1AUMitogen-activated protein kinase 14 / 0.829
3p7c P7CMitogen-activated protein kinase 14 / 0.771
3e93 19BMitogen-activated protein kinase 14 / 0.743
3hv4 L51Mitogen-activated protein kinase 14 / 0.730
3hv3 R49Mitogen-activated protein kinase 14 / 0.725
3npc B96Mitogen-activated protein kinase 9 2.7.11.24 0.719
3p7b P7BMitogen-activated protein kinase 14 / 0.712
3hv5 R24Mitogen-activated protein kinase 14 / 0.708
3d7z GK5Mitogen-activated protein kinase 14 / 0.699
3gcq 1BUMitogen-activated protein kinase 14 / 0.696
4twn B96Ephrin type-A receptor 3 2.7.10.1 0.684
3e92 G6AMitogen-activated protein kinase 14 / 0.682
3gcu R48Mitogen-activated protein kinase 14 / 0.679
3gcv SS6Mitogen-activated protein kinase 14 / 0.677
4f7j 0SUCyclin-dependent kinase 8 2.7.11.22 0.667
4f7n 0SVCyclin-dependent kinase 8 2.7.11.22 0.667
3s4q NK0Mitogen-activated protein kinase 14 / 0.666
4f7l 0SOCyclin-dependent kinase 8 2.7.11.22 0.663
4k9y K9YFocal adhesion kinase 1 2.7.10.2 0.663
1kv1 BMUMitogen-activated protein kinase 14 / 0.662
3hv6 R39Mitogen-activated protein kinase 14 / 0.653
3nww 3NWMitogen-activated protein kinase 14 / 0.651
3rin I2OMitogen-activated protein kinase 14 / 0.650