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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nlv H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.978
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.932
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.922
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.922
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.921
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.919
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.919
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.918
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.918
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.917
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.917
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.916
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.916
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.916
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.905
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.905
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.904
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.904
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.904
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.903
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.903
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.903
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.902
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.902
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.902
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.902
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.902
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.901
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.901
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.901
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.901
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.900
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.899
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.899
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.899
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.899
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.897
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.897
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.897
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.896
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.895
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.895
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.884
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.884
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.884
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.883
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.883
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.883
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.883
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.883
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.883
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.883
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.882
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.881
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.881
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.881
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.881
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.880
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.880
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.880
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.876
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.874
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.871
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.866
3png H4BNitric oxide synthase, brain 1.14.13.39 0.866
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.866
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.866
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.866
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.864
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.863
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.862
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.861
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.860
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.857
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.852
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.852
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.851
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.851
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.848
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.845
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.844
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.834
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.819
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.817
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.817
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.815
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.808
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.801
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.791
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.765
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.727
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.713
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.711
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.706
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.699
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.699
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.683
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.677
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.673
4e5f 0N7Polymerase acidic protein / 0.660
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.655
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.654