Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3nlk H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.963
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.940
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.930
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.922
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.922
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.921
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.921
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.921
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.920
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.920
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.919
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.919
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.918
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.917
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.914
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.908
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.908
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.905
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.904
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.904
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.904
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.904
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.904
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.903
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.903
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.903
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.903
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.902
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.901
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.901
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.901
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.900
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.899
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.899
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.899
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.898
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.898
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.898
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.897
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.896
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.894
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.893
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.888
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.888
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.887
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.885
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.885
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.884
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.883
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.883
3png H4BNitric oxide synthase, brain 1.14.13.39 0.883
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.882
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.881
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.876
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.874
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.873
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.870
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.870
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.868
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.866
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.866
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.864
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.862
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.860
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.860
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.853
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.849
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.844
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.839
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.836
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.835
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.831
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.830
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.824
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.816
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.815
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.813
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.812
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.807
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.804
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.799
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.777
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.775
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.761
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.759
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.748
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.747
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.727
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.723
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.722
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.720
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.700
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.695
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.690
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.690
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.683
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.681
4gvq N4MMethenyltetrahydromethanopterin cyclohydrolase 3.5.4.27 0.663
4e5f 0N7Polymerase acidic protein / 0.660
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.653
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.651