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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3mmf D9H Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.913
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.838
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.792
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.790
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.780
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.779
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.777
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.766
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.765
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.764
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.763
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.758
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.758
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.758
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.757
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.756
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.756
1okm SABCarbonic anhydrase 2 4.2.1.1 0.755
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.752
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.752
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.751
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.750
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.749
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.749
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.748
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.748
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.748
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.746
3mho J43Carbonic anhydrase 2 4.2.1.1 0.742
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.741
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.741
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.738
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.736
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.735
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.733
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.729
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.728
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.728
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.728
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.727
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.727
4uov AZMCarbonate dehydratase / 0.726
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.724
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.722
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.721
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.718
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.717
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.715
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.714
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.714
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.714
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.712
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.712
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.711
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.710
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.710
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.710
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.710
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.710
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.709
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.708
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.706
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.706
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.706
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.705
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.704
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.703
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.702
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.701
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.699
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.695
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.694
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.694
1eou SMSCarbonic anhydrase 2 4.2.1.1 0.692
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.692
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.691
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.689
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.688
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.687
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.686
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.685
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.685
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.684
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.684
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.684
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.681
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.679
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.678
2h15 B19Carbonic anhydrase 2 4.2.1.1 0.677
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.675
4kni E1ECarbonic anhydrase 2 4.2.1.1 0.674
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.673
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.673
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.671
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.671
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.671
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.667
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.666
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.666
3myq E27Carbonic anhydrase 2 4.2.1.1 0.664
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.662
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.661
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.661
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.661
1okl MNSCarbonic anhydrase 2 4.2.1.1 0.658
4kp5 E1FCarbonic anhydrase 12 4.2.1.1 0.658
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.657
3po6 DT9Carbonic anhydrase 2 4.2.1.1 0.655
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.654
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.651