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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3mho J43 Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3mho J43Carbonic anhydrase 2 4.2.1.1 0.893
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.796
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.788
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.784
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.779
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.773
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.771
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.769
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.765
1okm SABCarbonic anhydrase 2 4.2.1.1 0.759
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.759
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.759
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.758
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.757
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.755
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.752
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.752
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.750
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.747
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.747
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.745
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.745
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.744
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.742
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.742
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.739
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.737
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.735
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.734
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.733
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.732
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.730
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.729
1okn STBCarbonic anhydrase 2 4.2.1.1 0.726
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.725
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.723
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.723
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.722
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.722
4uov AZMCarbonate dehydratase / 0.721
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.720
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.715
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.715
3sax E50Carbonic anhydrase 2 4.2.1.1 0.715
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.715
4kni E1ECarbonic anhydrase 2 4.2.1.1 0.715
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.714
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.713
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.713
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.712
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.711
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.710
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.710
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.710
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.709
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.709
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.706
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.705
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.705
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.704
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.703
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.700
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.700
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.699
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.698
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.698
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.698
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.697
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.697
4xiw AZMCarbonic anhydrase, alpha type / 0.697
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.696
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.695
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.694
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.694
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.691
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.691
3m98 E02Carbonic anhydrase 2 4.2.1.1 0.691
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.691
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.690
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.690
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.689
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.688
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.685
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.684
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.683
3bl1 BL1Carbonic anhydrase 2 4.2.1.1 0.682
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.682
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.679
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.678
3myq E27Carbonic anhydrase 2 4.2.1.1 0.678
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.677
4knm E1ECarbonic anhydrase 13 4.2.1.1 0.674
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.668
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.667
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.667
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.665
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.663
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.663
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.663
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.663
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.662
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.662
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.662
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.661
3hku TORCarbonic anhydrase 2 4.2.1.1 0.659
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.659
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.657
1eou SMSCarbonic anhydrase 2 4.2.1.1 0.654
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.654
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.653
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.652
3bet CTFCarbonic anhydrase 2 4.2.1.1 0.650
3oim VZ5Carbonic anhydrase 2 4.2.1.1 0.650
4kp5 E1FCarbonic anhydrase 12 4.2.1.1 0.650