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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3mb9 ZST Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3mb9 ZSTAldose reductase 1.1.1.21 1.281
3len ZSTAldose reductase 1.1.1.21 1.204
2pdi ZSTAldose reductase 1.1.1.21 1.089
2pd5 ZSTAldose reductase 1.1.1.21 1.053
2pdn 47DAldose reductase 1.1.1.21 1.029
2dv0 ZSTAldose reductase 1.1.1.21 1.023
2dux ZSTAldose reductase 1.1.1.21 1.022
2fz8 ZSTAldose reductase 1.1.1.21 1.019
2fz9 ZSTAldose reductase 1.1.1.21 1.009
2pdm ZSTAldose reductase 1.1.1.21 1.005
2hvn ZSTAldose reductase 1.1.1.21 0.995
2pdf ZSTAldose reductase 1.1.1.21 0.941
3m0i ZSTAldose reductase 1.1.1.21 0.940
2hv5 ZSTAldose reductase 1.1.1.21 0.914
2pdb ZSTAldose reductase 1.1.1.21 0.896
2hvo ZSTAldose reductase 1.1.1.21 0.888
2duz ZSTAldose reductase 1.1.1.21 0.883
2pdx ZSTAldose reductase 1.1.1.21 0.873
2pdg 47DAldose reductase 1.1.1.21 0.852
1t40 ID5Aldose reductase 1.1.1.21 0.791
2pdh 47DAldose reductase 1.1.1.21 0.779
1frb ZSTAldose reductase-related protein 2 / 0.748
3lbo LDTAldose reductase 1.1.1.21 0.748
2pdc 393Aldose reductase 1.1.1.21 0.744
3ld5 LDTAldose reductase 1.1.1.21 0.743
2pdq 47DAldose reductase 1.1.1.21 0.733
3ght LDTAldose reductase 1.1.1.21 0.713
3t42 3T4Aldose reductase 1.1.1.21 0.705
2ikj 393Aldose reductase 1.1.1.21 0.704
2pdp 393Aldose reductase 1.1.1.21 0.687
3lz5 LDTAldose reductase 1.1.1.21 0.685
3lql LDTAldose reductase 1.1.1.21 0.682
4gca 2X9Aldose reductase 1.1.1.21 0.680
4yu1 53NAldose reductase 1.1.1.21 0.680
2pdj 393Aldose reductase 1.1.1.21 0.679
3s3g TLTAldose reductase 1.1.1.21 0.673
1z3n 3NAAldose reductase 1.1.1.21 0.665
3m64 393Aldose reductase 1.1.1.21 0.665
3m4h 388Aldose reductase 1.1.1.21 0.652
3g5e Q74Aldose reductase 1.1.1.21 0.651