Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3lzu | 017 | Gag-Pol polyprotein | 3.4.23.16 |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3lzu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.360 | |
| 3d20 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.185 | |
| 3ekt | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.150 | |
| 3lzs | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.146 | |
| 2ien | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.140 | |
| 3ggu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.131 | |
| 4dqc | 017 | Gag-Pol polyprotein | / | 1.130 | |
| 2f81 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.127 | |
| 3pwm | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.126 | |
| 3mws | 017 | Pol protein | / | 1.119 | |
| 2f80 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.111 | |
| 4dqe | 017 | Gag-Pol polyprotein | / | 1.106 | |
| 3oxw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.105 | |
| 4dqh | 017 | Gag-Pol polyprotein | / | 1.104 | |
| 2qci | 065 | Gag-Pol polyprotein | 3.4.23.16 | 1.101 | |
| 1t7i | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.096 | |
| 3o9e | A60 | Pol polyprotein | / | 1.088 | |
| 4heg | G52 | Gag-Pol polyprotein | 3.4.23.16 | 1.082 | |
| 3em6 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.077 | |
| 2z4o | 065 | Gag-Pol polyprotein | 3.4.23.16 | 1.076 | |
| 4dqf | 017 | Gag-Pol polyprotein | / | 1.073 | |
| 2ieo | 017 | Protease | / | 1.067 | |
| 3lzv | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.067 | |
| 3r4b | 74T | Gag-Pol polyprotein | / | 1.063 | |
| 3st5 | G89 | Gag-Pol polyprotein | 3.4.23.16 | 1.060 | |
| 2qd8 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 1.053 | |
| 3o9a | K14 | Pol polyprotein | / | 1.053 | |
| 4dqb | 017 | Gag-Pol polyprotein | / | 1.051 | |
| 4q1w | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.051 | |
| 1t3r | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.048 | |
| 3ucb | 017 | Gag-Pol polyprotein | / | 1.046 | |
| 3o9h | K2E | Gag-Pol polyprotein | / | 1.045 | |
| 3oy4 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.043 | |
| 4i8z | G08 | Gag-Pol polyprotein | 3.4.23.16 | 1.040 | |
| 4hdf | G52 | Gag-Pol polyprotein | 3.4.23.16 | 1.039 | |
| 2qd7 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 1.038 | |
| 3ecg | 065 | Gag-Pol polyprotein | 3.4.23.47 | 1.034 | |
| 4njt | 017 | Protease | / | 1.033 | |
| 4njs | G08 | Protease | / | 1.029 | |
| 2fdd | 385 | Pol protein | / | 1.028 | |
| 2f8g | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.027 | |
| 3cyw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 1.016 | |
| 3o9f | K2D | Gag-Pol polyprotein | / | 1.014 | |
| 2i4u | DJR | Protease | / | 1.011 | |
| 3o99 | K13 | Pol polyprotein | / | 1.011 | |
| 3ok9 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 1.003 | |
| 3qaa | G04 | Gag-Pol polyprotein | 3.4.23.16 | 1.003 | |
| 2idw | 017 | Protease | / | 1.001 | |
| 3o9d | K19 | Pol polyprotein | / | 1.001 | |
| 3o9c | K20 | Pol polyprotein | / | 0.999 | |
| 2hs1 | 017 | Protease | / | 0.995 | |
| 3nu9 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.992 | |
| 3jvy | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.989 | |
| 3o9i | A61 | Gag-Pol polyprotein | / | 0.987 | |
| 3ttp | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.986 | |
| 4q1y | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.981 | |
| 2qd6 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.978 | |
| 3jw2 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.978 | |
| 4dfg | 0JV | Gag-Pol polyprotein | 3.4.23.16 | 0.973 | |
| 3i6o | GR6 | Gag-Pol polyprotein | 3.4.23.16 | 0.969 | |
| 2hb3 | GRL | Protease | / | 0.964 | |
| 3d1z | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.960 | |
| 3vfa | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.959 | |
| 4q1x | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.958 | |
| 3o9b | K2A | Pol polyprotein | / | 0.957 | |
| 3s54 | 017 | Protease | / | 0.956 | |
| 4kb9 | G79 | Protease | / | 0.956 | |
| 2i4x | KGQ | Protease | / | 0.947 | |
| 3t3c | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.947 | |
| 3dk1 | G05 | Gag-Pol polyprotein | 3.4.23.16 | 0.943 | |
| 4hla | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.942 | |
| 3nu6 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.934 | |
| 2i4v | DJR | V-1 protease | / | 0.929 | |
| 3ekv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.924 | |
| 3ec0 | GRL | Gag-Pol polyprotein | 3.4.23.47 | 0.915 | |
| 4hdp | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.915 | |
| 3em3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.913 | |
| 3sab | F78 | Protease | / | 0.913 | |
| 2hs2 | 017 | Protease | / | 0.912 | |
| 3vf5 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.910 | |
| 3vfb | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.909 | |
| 3djk | G55 | Gag-Pol polyprotein | 3.4.23.16 | 0.904 | |
| 4ye3 | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.898 | |
| 3vf7 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.895 | |
| 4djo | MK5 | Pol polyprotein | / | 0.887 | |
| 3o9g | F53 | Gag-Pol polyprotein | / | 0.885 | |
| 3bvb | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.877 | |
| 3oxv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.876 | |
| 3gi4 | K60 | Gag-Pol polyprotein | / | 0.868 | |
| 3mxe | K54 | Gag-Pol polyprotein | 3.4.23.16 | 0.868 | |
| 2fde | 385 | Gag-Pol polyprotein | 3.4.23.16 | 0.865 | |
| 3i7e | DJR | Gag-Pol polyprotein | / | 0.865 | |
| 4j55 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.865 | |
| 2qi5 | MZ7 | Gag-Pol polyprotein | / | 0.862 | |
| 3nu3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.862 | |
| 4j54 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.862 | |
| 1t7j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.860 | |
| 3nuo | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.856 | |
| 4djr | 0KJ | Pol polyprotein | / | 0.854 | |
| 1d4l | PI9 | Gag-Pol polyprotein | 3.4.23.16 | 0.852 | |
| 3mxd | K53 | Gag-Pol polyprotein | 3.4.23.16 | 0.851 | |
| 3nu4 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.849 | |
| 3sa8 | K83 | Protease | / | 0.848 | |
| 1hpv | 478 | Gag-Pol polyprotein | / | 0.846 | |
| 2qi6 | MZ8 | Gag-Pol polyprotein | / | 0.846 | |
| 3sac | AF8 | Protease | / | 0.845 | |
| 4hdb | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.844 | |
| 3nuj | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.842 | |
| 4djq | M86 | Pol polyprotein | / | 0.840 | |
| 2qi4 | MZ6 | Gag-Pol polyprotein | / | 0.836 | |
| 3sm2 | 478 | Putative gag-pro-pol polyprotein | / | 0.835 | |
| 3gi5 | K62 | Gag-Pol polyprotein | / | 0.834 | |
| 2qi7 | MZ9 | Gag-Pol polyprotein | / | 0.832 | |
| 1z1r | HBH | Gag-Pol polyprotein | 3.4.23.16 | 0.828 | |
| 3sa4 | F72 | Protease | / | 0.826 | |
| 4rvj | 478 | Protease | / | 0.826 | |
| 4j5j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.824 | |
| 2qhy | MZ1 | Gag-Pol polyprotein | / | 0.823 | |
| 3gi6 | D78 | Gag-Pol polyprotein | / | 0.822 | |
| 2i0a | MUI | Protease | / | 0.821 | |
| 2i4w | KGQ | Protease | / | 0.818 | |
| 2i4d | QFI | Protease | / | 0.813 | |
| 3sa7 | 55A | Protease | / | 0.811 | |
| 1z1h | HBB | Gag-Pol polyprotein | 3.4.23.16 | 0.809 | |
| 3nu5 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.808 | |
| 3sa6 | F71 | Protease | / | 0.808 | |
| 3s43 | 478 | Protease | / | 0.804 | |
| 2qi3 | MZ5 | Gag-Pol polyprotein | / | 0.803 | |
| 2qi0 | MZ3 | Gag-Pol polyprotein | / | 0.796 | |
| 3sa3 | 23X | Protease | / | 0.782 | |
| 4djp | M73 | Pol polyprotein | / | 0.774 | |
| 1hih | C20 | Gag-Pol polyprotein | / | 0.772 | |
| 3el9 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.772 | |
| 2psu | MUU | Protease | / | 0.769 | |
| 2i0d | MUT | Protease | / | 0.768 | |
| 3k4v | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.768 | |
| 1fg6 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.767 | |
| 2pym | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.767 | |
| 3d1y | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.767 | |
| 2r3w | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.765 | |
| 3eky | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.765 | |
| 3sa9 | A68 | Protease | / | 0.762 | |
| 2psv | MUV | Protease | / | 0.761 | |
| 1fgc | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.760 | |
| 2pk6 | O33 | V-1 protease | / | 0.760 | |
| 1iiq | 0ZR | Gag-Pol polyprotein | 3.4.23.16 | 0.758 | |
| 2qak | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.756 | |
| 3tl9 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.756 | |
| 4qgi | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.753 | |
| 3oxx | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.752 | |
| 1mtr | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.751 | |
| 2nmy | ROC | Protease | / | 0.751 | |
| 2fxe | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.750 | |
| 3saa | 77F | Protease | / | 0.750 | |
| 3s56 | ROC | Protease | / | 0.749 | |
| 1k6t | XN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.747 | |
| 3el4 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.747 | |
| 1b6l | PI4 | Gag-Pol polyprotein | 3.4.23.16 | 0.745 | |
| 1ohr | 1UN | V-1 PROTEASE protein | / | 0.741 | |
| 1ida | 0PO | Gag-Pol polyprotein | 3.4.23.47 | 0.737 | |
| 4fe6 | 0TQ | Gag-Pol polyprotein | 3.4.23.16 | 0.737 | |
| 3dck | KVI | Protease | / | 0.736 | |
| 3qp0 | NI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.734 | |
| 2aqu | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.733 | |
| 3el1 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.733 | |
| 3nwq | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.733 | |
| 1ffi | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.732 | |
| 2qhz | MZ2 | Gag-Pol polyprotein | / | 0.727 | |
| 1npv | L27 | Gag-Pol polyprotein | 3.4.23.16 | 0.726 | |
| 2aoe | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.725 | |
| 1dw6 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.722 | |
| 3nwx | KVS | Gag-Pol polyprotein | 3.4.23.16 | 0.722 | |
| 1m0b | 0ZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.720 | |
| 2p3a | 3TL | Pol protein | / | 0.720 | |
| 1sdu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.718 | |
| 3kdb | 006 | Gag-Pol polyprotein | 3.4.23.16 | 0.718 | |
| 3ufn | ROC | Gag-Pol polyprotein | / | 0.718 | |
| 1hvj | A78 | Gag-Pol polyprotein | / | 0.717 | |
| 3pwr | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.717 | |
| 3s85 | LK0 | Gag-Pol polyprotein | / | 0.717 | |
| 3slz | 3TL | Putative gag-pro-pol polyprotein | / | 0.717 | |
| 1k2b | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.715 | |
| 1fej | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.714 | |
| 2f3k | RO1 | Protease | / | 0.714 | |
| 3ndt | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.714 | |
| 1izi | Q50 | Gag-Pol polyprotein | 3.4.23.16 | 0.713 | |
| 2fle | AI | Protease | / | 0.713 | |
| 2q63 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.713 | |
| 3cyx | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.712 | |
| 3kfr | 3TL | Gag-Pol polyprotein | / | 0.712 | |
| 1d4j | MSC | Gag-Pol polyprotein | 3.4.23.16 | 0.711 | |
| 1mrx | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.710 | |
| 1pro | A88 | Gag-Pol polyprotein | / | 0.710 | |
| 2a1e | IPF | Gag-Pol polyprotein | 3.4.23.16 | 0.710 | |
| 3sa5 | A69 | Protease | / | 0.710 | |
| 3kfs | 3TL | Gag-Pol polyprotein | / | 0.707 | |
| 1k2c | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.705 | |
| 1tcx | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.705 | |
| 2nnk | ROC | Protease | / | 0.704 | |
| 1a8g | 2Z4 | Gag-Pol polyprotein | 3.4.23.16 | 0.702 | |
| 2p3b | 3TL | V-1 PROTEASE protein | / | 0.702 | |
| 2p3b | 3TL | V-1 protease | / | 0.702 | |
| 1fff | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.701 | |
| 3ekw | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.701 | |
| 4gb2 | 0LQ | Gag-Pol polyprotein | 2.7.7.49 | 0.700 | |
| 1ajv | NMB | Gag-Pol polyprotein | 3.4.23.16 | 0.699 | |
| 2qhc | AB1 | Protease | / | 0.698 | |
| 1xl5 | 190 | Gag-Pol polyprotein | 3.4.23.16 | 0.697 | |
| 1b6m | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.695 | |
| 2b60 | RIT | Pol polyprotein | / | 0.695 | |
| 2q54 | MU1 | Protease | / | 0.694 | |
| 2uy0 | HV1 | Gag-Pol polyprotein | 3.4.23.16 | 0.694 | |
| 3ggx | GGX | Gag-Pol polyprotein | / | 0.694 | |
| 1ebz | BEC | Gag-Pol polyprotein | 3.4.23.16 | 0.693 | |
| 3el0 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.693 | |
| 4k4p | 3TL | Gag-Pol polyprotein | / | 0.693 | |
| 3d1x | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.692 | |
| 3nyg | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.692 | |
| 1hvi | A77 | Protease | / | 0.691 | |
| 2bb9 | AKC | Gag-Pol polyprotein | 3.4.23.16 | 0.690 | |
| 3bgc | LJH | Gag-Pol polyprotein | 3.4.23.16 | 0.690 | |
| 1sdv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.689 | |
| 2p3c | 3TL | Protease | / | 0.687 | |
| 3hzc | 2NC | Protease | / | 0.687 | |
| 2nnp | ROC | Protease | / | 0.686 | |
| 1siv | PSI | Gag-Pol polyprotein | / | 0.685 | |
| 2fxd | DR7 | Pol polyprotein | / | 0.685 | |
| 3ekq | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.685 | |
| 3kdc | JZP | Gag-Pol polyprotein | 3.4.23.16 | 0.685 | |
| 1ec0 | BED | Gag-Pol polyprotein | 3.4.23.16 | 0.684 | |
| 1npa | 3NH | Gag-Pol polyprotein | 3.4.23.16 | 0.681 | |
| 1npw | LGZ | Gag-Pol polyprotein | 3.4.23.16 | 0.681 | |
| 1hvk | A79 | Gag-Pol polyprotein | / | 0.678 | |
| 3ekp | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.678 | |
| 1hvl | A76 | Gag-Pol polyprotein | / | 0.677 | |
| 1msn | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.677 | |
| 1zsr | 0ZT | Gag-Pol polyprotein | 3.4.23.16 | 0.676 | |
| 1ody | LP1 | Gag-Pol polyprotein | 3.4.23.16 | 0.675 | |
| 1sdt | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.674 | |
| 2r38 | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.674 | |
| 1sh9 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.673 | |
| 1hiv | 1ZK | Gag-Pol polyprotein | / | 0.672 | |
| 3em4 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.672 | |
| 1wbm | BLL | Pol protein | / | 0.669 | |
| 1a94 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.666 | |
| 1ff0 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.666 | |
| 1rl8 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.666 | |
| 2wl0 | 5AH | Gag-Pol polyprotein | / | 0.666 | |
| 1b6p | PI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.665 | |
| 1wbk | 568 | Pol protein | / | 0.665 | |
| 3dcr | KVS | Protease | / | 0.665 | |
| 1hii | C20 | Gag-Pol polyprotein | / | 0.664 | |
| 2z54 | AB1 | Gag-Pol polyprotein | 3.4.23.16 | 0.663 | |
| 1ec3 | MS3 | Gag-Pol polyprotein | 3.4.23.16 | 0.660 | |
| 1mrw | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.660 | |
| 1k6p | XN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.659 | |
| 1zsf | 0ZS | Gag-Pol polyprotein | 3.4.23.16 | 0.659 | |
| 3gga | GGW | Gag-Pol polyprotein | / | 0.659 | |
| 3i2l | 2NC | Protease | / | 0.657 | |
| 3oxc | ROC | Protease | / | 0.656 | |
| 1mes | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.655 | |
| 1meu | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.654 | |
| 3dm6 | 757 | Beta-secretase 1 | 3.4.23.46 | 0.654 | |
| 1d4i | BEG | Gag-Pol polyprotein | 3.4.23.16 | 0.653 | |
| 1d4k | PI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.653 | |
| 2rkf | AB1 | Pol protein | / | 0.653 | |
| 1eag | A70 | Candidapepsin-2 | 3.4.23.24 | 0.652 | |
| 3ogq | AB1 | Pol polyprotein | / | 0.652 | |
| 1fg8 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.651 | |
| 1hos | PHP | Gag-Pol polyprotein | / | 0.650 | |
| 2pk5 | 075 | Protease | / | 0.650 | |
| 3bva | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.650 |