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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3lql LDT Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3lql LDTAldose reductase 1.1.1.21 1.145
3ld5 LDTAldose reductase 1.1.1.21 1.121
3lz5 LDTAldose reductase 1.1.1.21 1.080
2qxw LDTAldose reductase 1.1.1.21 1.055
3lbo LDTAldose reductase 1.1.1.21 1.044
3ghr LDTAldose reductase 1.1.1.21 1.037
3ghs LDTAldose reductase 1.1.1.21 1.037
3ght LDTAldose reductase 1.1.1.21 1.028
3ghu LDTAldose reductase 1.1.1.21 1.024
1us0 LDTAldose reductase 1.1.1.21 1.022
2i16 LDTAldose reductase 1.1.1.21 1.022
2i17 LDTAldose reductase 1.1.1.21 1.022
3m4h 388Aldose reductase 1.1.1.21 0.995
2iki 388Aldose reductase 1.1.1.21 0.980
3m64 393Aldose reductase 1.1.1.21 0.856
2ikj 393Aldose reductase 1.1.1.21 0.854
3mc5 393Aldose reductase 1.1.1.21 0.836
2pdj 393Aldose reductase 1.1.1.21 0.822
2pdc 393Aldose reductase 1.1.1.21 0.816
2pzn 393Aldose reductase 1.1.1.21 0.816
3t42 3T4Aldose reductase 1.1.1.21 0.808
2dux ZSTAldose reductase 1.1.1.21 0.792
2hvo ZSTAldose reductase 1.1.1.21 0.778
1iei ZESAldose reductase 1.1.1.21 0.762
2fz9 ZSTAldose reductase 1.1.1.21 0.743
2pd5 ZSTAldose reductase 1.1.1.21 0.741
2pdh 47DAldose reductase 1.1.1.21 0.730
2pdu 393Aldose reductase 1.1.1.21 0.727
2fz8 ZSTAldose reductase 1.1.1.21 0.725
2pdn 47DAldose reductase 1.1.1.21 0.711
2duz ZSTAldose reductase 1.1.1.21 0.709
2pdp 393Aldose reductase 1.1.1.21 0.707
2pdx ZSTAldose reductase 1.1.1.21 0.700
1z89 62PAldose reductase 1.1.1.21 0.696
3g5e Q74Aldose reductase 1.1.1.21 0.690
2pdf ZSTAldose reductase 1.1.1.21 0.685
2hvn ZSTAldose reductase 1.1.1.21 0.683
3mb9 ZSTAldose reductase 1.1.1.21 0.682
3m0i ZSTAldose reductase 1.1.1.21 0.679
2dv0 ZSTAldose reductase 1.1.1.21 0.678
2pdm ZSTAldose reductase 1.1.1.21 0.674
2pdi ZSTAldose reductase 1.1.1.21 0.669
2hv5 ZSTAldose reductase 1.1.1.21 0.663
1jt6 DEQHTH-type transcriptional regulator QacR / 0.662
3len ZSTAldose reductase 1.1.1.21 0.662
1pwl BFIAldose reductase 1.1.1.21 0.660
4yu1 53NAldose reductase 1.1.1.21 0.658
2pdq 47DAldose reductase 1.1.1.21 0.655
2nvc ITAAldose reductase 1.1.1.21 0.654