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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ld5 LDT Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ld5 LDTAldose reductase 1.1.1.21 1.176
3lql LDTAldose reductase 1.1.1.21 1.121
3lz5 LDTAldose reductase 1.1.1.21 1.101
3lbo LDTAldose reductase 1.1.1.21 1.094
2qxw LDTAldose reductase 1.1.1.21 1.073
3ghu LDTAldose reductase 1.1.1.21 1.071
3ght LDTAldose reductase 1.1.1.21 1.064
3ghs LDTAldose reductase 1.1.1.21 1.059
3ghr LDTAldose reductase 1.1.1.21 1.058
2i17 LDTAldose reductase 1.1.1.21 1.040
2i16 LDTAldose reductase 1.1.1.21 1.039
1us0 LDTAldose reductase 1.1.1.21 1.035
3m4h 388Aldose reductase 1.1.1.21 1.024
2iki 388Aldose reductase 1.1.1.21 0.976
2ikj 393Aldose reductase 1.1.1.21 0.886
3m64 393Aldose reductase 1.1.1.21 0.884
2pdj 393Aldose reductase 1.1.1.21 0.841
2pdc 393Aldose reductase 1.1.1.21 0.824
3t42 3T4Aldose reductase 1.1.1.21 0.823
1iei ZESAldose reductase 1.1.1.21 0.809
3mc5 393Aldose reductase 1.1.1.21 0.801
2pdp 393Aldose reductase 1.1.1.21 0.800
2pzn 393Aldose reductase 1.1.1.21 0.800
2pdu 393Aldose reductase 1.1.1.21 0.768
2fz9 ZSTAldose reductase 1.1.1.21 0.753
2dux ZSTAldose reductase 1.1.1.21 0.748
3mb9 ZSTAldose reductase 1.1.1.21 0.743
2pdg 47DAldose reductase 1.1.1.21 0.732
2pdh 47DAldose reductase 1.1.1.21 0.730
3g5e Q74Aldose reductase 1.1.1.21 0.730
2pdn 47DAldose reductase 1.1.1.21 0.716
1frb ZSTAldose reductase-related protein 2 / 0.714
3m0i ZSTAldose reductase 1.1.1.21 0.703
4gca 2X9Aldose reductase 1.1.1.21 0.703
2hvn ZSTAldose reductase 1.1.1.21 0.701
2fz8 ZSTAldose reductase 1.1.1.21 0.698
2hv5 ZSTAldose reductase 1.1.1.21 0.698
2dv0 ZSTAldose reductase 1.1.1.21 0.695
2pdl TOLAldose reductase 1.1.1.21 0.695
3s3g TLTAldose reductase 1.1.1.21 0.692
2pdb ZSTAldose reductase 1.1.1.21 0.691
2pdi ZSTAldose reductase 1.1.1.21 0.683
1z89 62PAldose reductase 1.1.1.21 0.681
3len ZSTAldose reductase 1.1.1.21 0.680
2iqd LPAAldose reductase 1.1.1.21 0.679
2hvo ZSTAldose reductase 1.1.1.21 0.677
2pdm ZSTAldose reductase 1.1.1.21 0.676
2duz ZSTAldose reductase 1.1.1.21 0.671
2nvc ITAAldose reductase 1.1.1.21 0.668
2pdq 47DAldose reductase 1.1.1.21 0.660
4yu1 53NAldose reductase 1.1.1.21 0.657
1ah3 TOLAldose reductase 1.1.1.21 0.653